Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00714 ATGGCCAAGCTTTCCCCTCTTGAAGAGCCTCTTTTGCATGGTGACTCTAGAGCAATCAACAATTCTGATTCCAGTAAGACTAGAGGAAATGAAAACTCAACCCGATATTCAAATGCAGGATTTTTCAGTATGCTTACTTTCTCTTGGATCAGTCCGTTAATAGCTCTAGGAAATGAGAAGACTTTAAACCATGAGGACCTCCCACTTCTTGCTACTGATGACAGTGCTTATGGGATTTTTCCAACATTTAGAAACAAAGTAGAGTCAGAGTGTGGTGTTCGAAATGTGACCACTCTTGGGCTGGTGAAGGTGTTATTCGTGTCAACTTGGCAAGGGATCTTTTTATCAGGTTTGTTTGCATTCCTGTATGCATGTGCTTCCTTTGTTGGACCCTTTCTTATTGACATCCTTGTTCAATACCTCAATGGAGAATACATGTTTGAAAATGAAGGCTATGTTTTGGCTGCGATATTTGTTGCTGCAAAGCTTGTGGAGTGTCTTTCACAGAGGCACTGGATGTTTAGGTTCCAGCAGGTTGGGGTTAGGATGCAATCGATGTTGGTGGCAATGATCTATGCTAAAGGTTTGACTCTTTCGTGTCAAGCAAAGGAGGTTTGTAGTACTGGGGAAATCATCAACTTAATGACTGTCGATGCTGAAAGAATTGGTGAATTTTGTTGGTACATGCATGATCCATGGATGTGTGTTTTGCAGCTTGCTTTAGCCCTGTTAATTCTCTATAGAAGTGTAGGTGTTGCTTCAATAGCTGCTCTTGCTGCCACTGTAATTGTCATGTTGCTAAACCATCCTGTGGCATCATTGCAAGAAAAGTTCCAAAGCAAGATAATGGAGTTCAAAGATAAAAGAATGAAGGCTACATCTGAGATTCTAAAGAATATGAGGATTCTAAAACTGCAAGCATGGGAGATGAAGTTCTTGTCAAAGATTATTCAGCTTAGGAGAACTGAGGAGATATGGCTAAAGAAATTTCTAGCTGGAACAGCAATGATTAGATTTCTCTTCCATAATGCCCCAACGTTTATTGCAGTGGTTACTTTTGGTACTTGTGTTCTTATAGGCATCCCACTTGAATCAGGAAAGGTCTTATCTGCACTTGCAACATTCCGAATTCTTCAAATGCCCATCTACAGTCTTCCTGACACAATTTCTATGATTGCACAAACTAAAATTTCTCTGGATAGGATTGCATCATTTCTTCGACTAGATGAATTGCAGACTGATATTGTACAGAAGCTTCCATGGGGTAGTTCCGATAAGGCAATTGAATTAGTGGACGGAAACTTCTCATGGGATTTATCTTCCCCTAATCCAACATTGAAAAACATAAATCTCAATGTTTTTCATGGTATGAGAGTAGCTGTATGTGGCACTGTTGGATCAGGCAAGTCTAGTTTACTTTCTTGTATTATAGGGGAAGTGCCTAAGATATCTGGGACATTGAAAATATGTGGAACAAAGGCTTATGTTTCTCAATCGCCATGGATACAGAGTGGCAAGATAGAAGACAACGTATTATTTGGTAAAGAGATGGACAGTGAAAAGTATCAGAAGGTGCTAGAAGCATGTTCCTTGGCAAAGGACCTTGAGGTTCTACCATTTGGTGATCAGACCATTATTGGGGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAATAGCCCGTGCTCTATACCAAGACGCTGATATATATCTTTTTGATGATCCCTTCAGTGCCGTTGATGCTCATACAGGATCCCATCTCTTTAAGGAGTGCTTGCTTGGCCTTTTAAATTCAAAAACTGTGATATACGTAACACATCAAGTAGAGTTCTTACCTGATGCTGATCTAATACTGGTTATGAGAGAAGGAAGGATAACTCAATCAGGAAAATATAATGACATTCTCAAGACAGGCACTGATTTTATGGAACTTGTAGGTGCACATAGAGAAGCTTTGTCTTCAATTAAGTCCTTAGAGAGAAGACCAACATTTAAAACATCAAGTACCACCAAGGAGAAAACAAATTCATTAAGTGATTTTGAACTTGAGCAAAATGTGGAAAACATGTATGGTGAAAATGATAAGCCAAACGATACACTTGAGCCCAAAGGACAACTTGTTCAAGAAGAAGAACGAGAAAAGGGTAGAGTTGAGTTTAAAGTGTACTGGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTGCCCTTCATATTACTTTCTCAGACACTCACTGTGGGTTTTCAGATTGCAAGCAATTACTGGATGACTGTTGCAACTCCTGTTTCAATAACTGCTGAACCTGATATTGGAAGCTTTACACTTATGGTTGTCTATGTGGCTTTGGCAATTGGAAGTTCCATTTTCACCTTCGCCAGATCATTTCTTGCTGTGATAGCTGGATACAAGACATCCACTGTGCTCTTTGATAAAATGCTGTTGTGTATTTTTCGAGCACCAATATCATTTTTTGATGCCACCCCAAGTGGTCGAATCCTCAATAGAGCTTCAGTAGACCAAAGCACACTAGATATGTACATTGCCAATCTATTATGGGCAATTACCTTAAATCTGGTTCAGCTTTTGGGAAATGTTGTTGTGATGTCTCAAGCTGCATGGCAGGTGTTCATAGTATTGATTCCTGTCATGGCAGCTAGCATATGGTACCAGCGGTACTATTCTGCATCTGCTAGAGAATTGGCACGATTGGTTGGTACATGTCAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTCTGGATCAACAAACATAAGAAGTTTTGAACAAGAACCAAGATTTAATGACATAAATATGAAGTTGATAGACAGATATTCCCAACCCAAACTATACAGTGCTACTGCAATTGAATGGCTGACTTTCCGATTGGATATTTTATCCACTCTCATATTTGCCTTCTGTTTGGTATTCTTGATATCTTTCCCAAATTCAATGACTACACCTGGCATTGCGGGATTGGCTGTGACATATGGACTTAATCTAAACTCTCTACAGACTAAAGTAATCTGGTTTCTTTGCAATTCGGAGAACAAAATTATATCTGTTGAAAGAATACTCCAGTACACATCCCTCCCAAGTGAAGCTCCTCTTGTGATTAAAGACAACCAGCCTGATTCTTCTTGGCCATCATTTGGCGAGATTCATATCCAGGATTTACAGGTTCAATATGCTCCTCACTTGCCTATTGTTTTACGAGGTCTTACTTGCACTTTTACTGCTGGAGCAAAAACTGGTATTGTGGGAAGAACAGGAAGTGGAAAATCAACTCTAGTGCAAACACTTCTCCGACTTATTGAACCTATGGCTGGAAAAATATTAATAGATAACATTAACATATCTTTGATTGGAATTCATGATTTGCGGTCTAAACTCAGCATTATTCCTCAAGATCCAACAATGTTTGAAGGGACTGTAAGAACCAACCTGGATCCACTGGAAGAGTACACAGATGAACAGATCTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGATGTAAGGAAAAAAGAAGGGAAGCTGGACTCCATAGTTACTGAGAATGGAGAAAATTGGAGTATAGGTCAAAGGCAATTGGTCTGCCTAGGCCGTGTTCTACTGAAGAAAAGCAAGATCTTGGTGCTTGATGAGGCTACTGCATCAGTTGATACAGCCACAGATAATATTATTCAGCAAACAGTTAAGCAACAGTTTTCAGAATCCACTGTCATTACCATTGCTCATAGGATAACTTCTATCATCGACAGTGACATGGTTCTGTTTTTAAATCAAGGGTTGGTTGAGGAATATGATTCACCAAAGAAACTTCTTGAGAACAAATCTTCATCTCTAGCTCAACTAGTTGCAGAATACACAAAGAGGTCAAACTCTGGTTTTGGAAATTAA 3915 0.3949 MAKLSPLEEPLLHGDSRAINNSDSSKTRGNENSTRYSNAGFFSMLTFSWISPLIALGNEKTLNHEDLPLLATDDSAYGIFPTFRNKVESECGVRNVTTLGLVKVLFVSTWQGIFLSGLFAFLYACASFVGPFLIDILVQYLNGEYMFENEGYVLAAIFVAAKLVECLSQRHWMFRFQQVGVRMQSMLVAMIYAKGLTLSCQAKEVCSTGEIINLMTVDAERIGEFCWYMHDPWMCVLQLALALLILYRSVGVASIAALAATVIVMLLNHPVASLQEKFQSKIMEFKDKRMKATSEILKNMRILKLQAWEMKFLSKIIQLRRTEEIWLKKFLAGTAMIRFLFHNAPTFIAVVTFGTCVLIGIPLESGKVLSALATFRILQMPIYSLPDTISMIAQTKISLDRIASFLRLDELQTDIVQKLPWGSSDKAIELVDGNFSWDLSSPNPTLKNINLNVFHGMRVAVCGTVGSGKSSLLSCIIGEVPKISGTLKICGTKAYVSQSPWIQSGKIEDNVLFGKEMDSEKYQKVLEACSLAKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLNSKTVIYVTHQVEFLPDADLILVMREGRITQSGKYNDILKTGTDFMELVGAHREALSSIKSLERRPTFKTSSTTKEKTNSLSDFELEQNVENMYGENDKPNDTLEPKGQLVQEEEREKGRVEFKVYWKYITTAYGGALVPFILLSQTLTVGFQIASNYWMTVATPVSITAEPDIGSFTLMVVYVALAIGSSIFTFARSFLAVIAGYKTSTVLFDKMLLCIFRAPISFFDATPSGRILNRASVDQSTLDMYIANLLWAITLNLVQLLGNVVVMSQAAWQVFIVLIPVMAASIWYQRYYSASARELARLVGTCQAPVIQHFSETISGSTNIRSFEQEPRFNDINMKLIDRYSQPKLYSATAIEWLTFRLDILSTLIFAFCLVFLISFPNSMTTPGIAGLAVTYGLNLNSLQTKVIWFLCNSENKIISVERILQYTSLPSEAPLVIKDNQPDSSWPSFGEIHIQDLQVQYAPHLPIVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQTLLRLIEPMAGKILIDNINISLIGIHDLRSKLSIIPQDPTMFEGTVRTNLDPLEEYTDEQIWEALDMCQLGDDVRKKEGKLDSIVTENGENWSIGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVKQQFSESTVITIAHRITSIIDSDMVLFLNQGLVEEYDSPKKLLENKSSSLAQLVAEYTKRSNSGFGN* 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00714 1304 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1058 1292 IPR003439 GO:0005524
Phac6g00714 1304 FunFam ABC transporter C family member 10 97 410 - -
Phac6g00714 1304 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 114 394 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00714 1304 SUPERFAMILY ABC transporter transmembrane region 110 407 IPR036640 GO:0005524|GO:0016020
Phac6g00714 1304 FunFam ABC transporter C family member 5 413 660 - -
Phac6g00714 1304 CDD ABC_6TM_ABCC_D2 739 1033 IPR044726 GO:0140359
Phac6g00714 1304 SUPERFAMILY ABC transporter transmembrane region 739 1040 IPR036640 GO:0005524|GO:0016020
Phac6g00714 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1050 1284 IPR027417 -
Phac6g00714 1304 Pfam ABC transporter transmembrane region 113 381 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00714 1304 Pfam ABC transporter transmembrane region 741 984 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00714 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 424 650 IPR027417 -
Phac6g00714 1304 Gene3D - 1041 1294 IPR027417 -
Phac6g00714 1304 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 741 1005 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00714 1304 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 428 651 IPR003439 GO:0005524
Phac6g00714 1304 FunFam ABC transporter C family member 3 1041 1293 - -
Phac6g00714 1304 FunFam ABC transporter C family member 5 703 1039 - -
Phac6g00714 1304 CDD ABC_6TM_ABCC_D1 115 402 IPR044746 GO:0140359
Phac6g00714 1304 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 37 1294 - -
Phac6g00714 1304 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524|GO:0016887
Phac6g00714 1304 Gene3D - 410 673 IPR027417 -
Phac6g00714 1304 Pfam ABC transporter 1076 1223 IPR003439 GO:0005524
Phac6g00714 1304 CDD ABCC_MRP_domain2 1056 1276 - -
Phac6g00714 1304 MobiDBLite consensus disorder prediction 1 32 - -
Phac6g00714 1304 CDD ABCC_MRP_domain1 428 628 - -
Phac6g00714 1304 Gene3D ABC transporter type 1, transmembrane domain 703 1039 IPR036640 GO:0005524|GO:0016020
Phac6g00714 1304 Gene3D ABC transporter type 1, transmembrane domain 94 409 IPR036640 GO:0005524|GO:0016020
Phac6g00714 1304 MobiDBLite consensus disorder prediction 17 32 - -
Phac6g00714 1304 Pfam ABC transporter 446 580 IPR003439 GO:0005524
Phac6g00714 1304 SMART AAA_5 1084 1269 IPR003593 GO:0016887
Phac6g00714 1304 SMART AAA_5 455 628 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00714 Phac-Chr6 11842656 11848861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00714 428 866 Calmodulin-binding Proteins AT2G36910 24.390 1.79e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00714 - K05666 gmx:106794105 2235.3