Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00713 ATGGCCAAGCTTTCCCCTCTTGAAGAGCCTCTTTTGCATGGTGACTCTAGAGCAATCAACAATTCTGATTCCAGTAAGACTAGAGGAAATGAAAACTCAACCCGATATTCAAATGCAGGATTTTTCAGTATGCTTACTTTCTCTTGGATCAGTCCGTTAATAGCTCTAGGAAATGAGAAGACTTTAAACCATGAGGACCTCCCACTTCTTGCTACTGATGACAGTGCTTATGGGATTTTTCCAACATTTAGAAACAAAGTAGAGTCAGAGTGTGGTGTTCGAAATGTGACCACTCTTGGGCTGGTGAAGGTGTTATTCGTGTCAACTTGGCAAGGGATCTTTTTATCAGGTTTGTTTGCATTCCTGTATGCATGTGCTTCCTTTGTTGGACCCTTTCTTATTGACATCCTTGTTCAATACCTCAATGGAGAATACATGTTTGAAAATGAAGGCTATGTTTTGGCTGCGATATTTGTTGCTGCAAAGCTTGTGGAGTGTCTTTCACAGAGGCACTGGATGTTTAGGTTCCAGCAGGTTGGGGTTAGGATGCAATCGATGTTGGTGGCAATGATCTATGCTAAAGGTTTGACTCTTTCGTGTCAAGCAAAGGAGGTTTGTAGTACTGGGGAAATCATCAACTTAATGACTGTCGATGCTGAAAGAATTGGTGAATTTTGTTGGTACATGCATGATCCATGGATGTGTGTTTTGCAGCTTGCTTTAGCCCTGTTAATTCTCTATAGAAGTGTAGGTGTTGCTTCAATAGCTGCTCTTGCTGCCACTGTAATTGTCATGTTGCTAAACCATCCTGTGGCATCATTGCAAGAAAAGTTCCAAAGCAAGATAATGGAGTTCAAAGATAAAAGAATGAAGGCTACATCTGAGATTCTAAAGAATATGAGGATTCTAAAACTGCAAGCATGGGAGATGAAGTTCTTGTCAAAGATTATTCAGCTTAGGAGAACTGAGGAGATATGGCTAAAGAAATTTCTAGCTGGAACAGCAATGATTAGATTTCTCTTCCATAATGCCCCAACGTTTATTGCAGTGGTTACTTTTGGTACTTGTGTTCTTATAGGCATCCCACTTGAATCAGGAAAGGTCTTATCTGCACTTGCAACATTCCGAATTCTTCAAATGCCCATCTACAGTCTTCCTGACACAATTTCTATGATTGCACAAACTAAAATTTCTCTGGATAGGATTGCATCATTTCTTCGACTAGATGAATTGCAGACTGATATTGTACAGAAGCTTCCATGGGGTAGTTCCGATAAGGCAATTGAATTAGTGGACGGAAACTTCTCATGGGATTTATCTTCCCCTAATCCAACATTGAAAAACATAAATCTCAATGTTTTTCATGGTATGAGAGTAGCTGTATGTGGCACTGTTGGATCAGGCAAGTCTAGTTTACTTTCTTGTATTATAGGGGAAGTGCCTAAGATATCTGGGACATTGAAAATATGTGGAACAAAGGCTTATGTTTCTCAATCGCCATGGATACAGAGTGGCAAGATAGAAGACAACGTATTATTTGGTAAAGAGATGGACAGTGAAAAGTATCAGAAGGTGCTAGAAGCATGTTCCTTGGCAAAGGACCTTGAGGTTCTACCATTTGGTGATCAGACCATTATTGGGGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAATAGCCCGTGCTCTATACCAAGACGCTGATATATATCTTTTTGATGATCCCTTCAGTGCCGTTGATGCTCATACAGGATCCCATCTCTTTAAGGAGTGCTTGCTTGGCCTTTTAAATTCAAAAACTGTGATATACGTAACACATCAAGTAGAGTTCTTACCTGATGCTGATCTAATACTGGTTATGAGAGAAGGAAGGATAACTCAATCAGGAAAATATAATGACATTCTCAAGACAGGCACTGATTTTATGGAACTTGTAGGTGCACATAGAGAAGCTTTGTCTTCAATTAAGTCCTTAGAGAGAAGACCAACATTTAAAACATCAAGTACCACCAAGGAGAAAACAAATTCATTAAGTGATTTTGAACTTGAGCAAAATGTGGAAAACATGTATGGTGAAAATGATAAGCCAAACGATACACTTGAGCCCAAAGGACAACTTGTTCAAGAAGAAGAACGAGAAAAGGGTAGAGTTGAGTTTAAAGTGTACTGGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTGCCCTTCATATTACTTTCTCAGACACTCACTGTGGGTTTTCAGATTGCAAGCAATTACTGGATGACTGTTGCAACTCCTGTTTCAATAACTGCTGAACCTGATATTGGAAGCTTTACACTTATGGTTGTCTATGTGGCTTTGGCAATTGGAAGTTCCATTTTCACCTTCGCCAGATCATTTCTTGCTGTGATAGCTGGATACAAGACATCCACTGTGCTCTTTGATAAAATGCTGTTGTGTATTTTTCGAGCACCAATATCATTTTTTGATGCCACCCCAAGTGGTCGAATCCTCAATAGAGCTTCAGTAGACCAAAGCACACTAGATATGTACATTGCCAATCTATTATGGGCAATTACCTTAAATCTGGTTCAGCTTTTGGGAAATGTTGTTGTGATGTCTCAAGCTGCATGGCAGGTGTTCATAGTATTGATTCCTGTCATGGCAGCTAGCATATGGTACCAGCGGTACTATTCTGCATCTGCTAGAGAATTGGCACGATTGGTTGGTACATGTCAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTCTGGATCAACAAACATAAGAAGTTTTGAACAAGAACCAAGATTTAATGACATAAATATGAAGTTGATAGACAGATATTCCCAACCCAAACTATACAGTGCTACTGCAATTGAATGGCTGACTTTCCGATTGGATATTTTATCCACTCTCATATTTGCCTTCTGTTTGGTATTCTTGATATCTTTCCCAAATTCAATGACTACACCTGGCATTGCGGGATTGGCTGTGACATATGGACTTAATCTAAACTCTCTACAGACTAAAGTAATCTGGTTTCTTTGCAATTCGGAGAACAAAATTATATCTGTTGAAAGAATACTCCAGTACACATCCCTCCCAAGTGAAGCTCCTCTTGTGATTAAAGACAACCAGCCTGATTCTTCTTGGCCATCATTTGGCGAGATTCATATCCAGGATTTACAGGTTCAATATGCTCCTCACTTGCCTATTGTTTTACGAGGTCTTACTTGCACTTTTACTGCTGGAGCAAAAACTGGTATTGTGGGAAGAACAGGAAGTGGAAAATCAACTCTAGTGCAAACACTTCTCCGACTTATTGAACCTATGGCTGGAAAAATATTAATAGATAACATTAACATATCTTTGATTGGAATTCATGATTTGCGGTCTAAACTCAGCATTATTCCTCAAGATCCAACAATGTTTGAAGGGACTGTAAGAACCAACCTGGATCCACTGGAAGAGTACACAGATGAACAGATCTGGGAGGTAATTTGGTTTTGTTTGTAA 3519 0.3944 MAKLSPLEEPLLHGDSRAINNSDSSKTRGNENSTRYSNAGFFSMLTFSWISPLIALGNEKTLNHEDLPLLATDDSAYGIFPTFRNKVESECGVRNVTTLGLVKVLFVSTWQGIFLSGLFAFLYACASFVGPFLIDILVQYLNGEYMFENEGYVLAAIFVAAKLVECLSQRHWMFRFQQVGVRMQSMLVAMIYAKGLTLSCQAKEVCSTGEIINLMTVDAERIGEFCWYMHDPWMCVLQLALALLILYRSVGVASIAALAATVIVMLLNHPVASLQEKFQSKIMEFKDKRMKATSEILKNMRILKLQAWEMKFLSKIIQLRRTEEIWLKKFLAGTAMIRFLFHNAPTFIAVVTFGTCVLIGIPLESGKVLSALATFRILQMPIYSLPDTISMIAQTKISLDRIASFLRLDELQTDIVQKLPWGSSDKAIELVDGNFSWDLSSPNPTLKNINLNVFHGMRVAVCGTVGSGKSSLLSCIIGEVPKISGTLKICGTKAYVSQSPWIQSGKIEDNVLFGKEMDSEKYQKVLEACSLAKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLNSKTVIYVTHQVEFLPDADLILVMREGRITQSGKYNDILKTGTDFMELVGAHREALSSIKSLERRPTFKTSSTTKEKTNSLSDFELEQNVENMYGENDKPNDTLEPKGQLVQEEEREKGRVEFKVYWKYITTAYGGALVPFILLSQTLTVGFQIASNYWMTVATPVSITAEPDIGSFTLMVVYVALAIGSSIFTFARSFLAVIAGYKTSTVLFDKMLLCIFRAPISFFDATPSGRILNRASVDQSTLDMYIANLLWAITLNLVQLLGNVVVMSQAAWQVFIVLIPVMAASIWYQRYYSASARELARLVGTCQAPVIQHFSETISGSTNIRSFEQEPRFNDINMKLIDRYSQPKLYSATAIEWLTFRLDILSTLIFAFCLVFLISFPNSMTTPGIAGLAVTYGLNLNSLQTKVIWFLCNSENKIISVERILQYTSLPSEAPLVIKDNQPDSSWPSFGEIHIQDLQVQYAPHLPIVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQTLLRLIEPMAGKILIDNINISLIGIHDLRSKLSIIPQDPTMFEGTVRTNLDPLEEYTDEQIWEVIWFCL* 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00713 1172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1050 1170 IPR027417 -
Phac6g00713 1172 FunFam ABC transporter C family member 5 413 660 - -
Phac6g00713 1172 Gene3D - 1041 1171 IPR027417 -
Phac6g00713 1172 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524|GO:0016887
Phac6g00713 1172 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 114 394 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00713 1172 SMART AAA_5 1084 1171 IPR003593 GO:0016887
Phac6g00713 1172 SMART AAA_5 455 628 IPR003593 GO:0016887
Phac6g00713 1172 MobiDBLite consensus disorder prediction 1 32 - -
Phac6g00713 1172 Pfam ABC transporter 1076 1167 IPR003439 GO:0005524
Phac6g00713 1172 CDD ABC_6TM_ABCC_D2 739 1033 IPR044726 GO:0140359
Phac6g00713 1172 SUPERFAMILY ABC transporter transmembrane region 739 1040 IPR036640 GO:0005524|GO:0016020
Phac6g00713 1172 FunFam ABC transporter C family member 10 97 410 - -
Phac6g00713 1172 CDD ABCC_MRP_domain1 428 628 - -
Phac6g00713 1172 FunFam ABC transporter C family member 5 703 1039 - -
Phac6g00713 1172 Gene3D - 410 673 IPR027417 -
Phac6g00713 1172 SUPERFAMILY ABC transporter transmembrane region 110 407 IPR036640 GO:0005524|GO:0016020
Phac6g00713 1172 MobiDBLite consensus disorder prediction 17 32 - -
Phac6g00713 1172 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 37 1168 - -
Phac6g00713 1172 Pfam ABC transporter transmembrane region 113 381 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00713 1172 Pfam ABC transporter transmembrane region 741 984 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00713 1172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 424 650 IPR027417 -
Phac6g00713 1172 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 741 1005 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00713 1172 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 428 651 IPR003439 GO:0005524
Phac6g00713 1172 Pfam ABC transporter 446 580 IPR003439 GO:0005524
Phac6g00713 1172 CDD ABC_6TM_ABCC_D1 115 402 IPR044746 GO:0140359
Phac6g00713 1172 Gene3D ABC transporter type 1, transmembrane domain 94 409 IPR036640 GO:0005524|GO:0016020
Phac6g00713 1172 Gene3D ABC transporter type 1, transmembrane domain 703 1039 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00713 Phac-Chr6 11842656 11848861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00713 428 866 Calmodulin-binding Proteins AT2G36910 24.390 8.36e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00713 - K05666 gmx:106794105 1996.86