Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00711 ATGAGGTTGCTGCCTCACTCTGATGGAAGGATGCAGAAGGTCCTGATAAAATGTTTGCTGGTTATTGTTAGTTTTTGCAATGCAAGTAGGACAGTTGTTGCCACCAATGGTGGGGTGGAAGTGATAATTGGTTTGTTGAGTTCTTGCACCAATGATACTAGGAGGTATTTGTTGGAGATTTTGAGTGTGTTAGCATTGAGGAGGGATGTTAGGAAGGCTCTCACTAGACTAAGAGCTCTTCACTACGTTGTGGAGGCTGCTAGTTTTGGGAGCATAGTGTCTAGGGAAAGGGCTTGTCAAGCAATTGGTTTGCTTGGAGTCACCAGACAGACTCGGCGTATGCTTGTTGAATTGGGAGCAATTCCAGTGCTTGTGTCGTTGTTTCGTGATGGAGAACACTCCACAAAGCTTGTTGCTGGTAATTCTCTTGGTGTGATATCTGCTCATGTGGATTACATTAGGCCAGTTGCTCAAGCTGGGGCTATCCCCCTTTATGCTGAGCTTCTTGAAGGACCTGATCCTTCTGGGAAAGAGATAGCTGAGGATGTTTTCTGTATATTGGCTGTTGCTGAGGCAAATGCTGTTGAAATTGCTGGTCATTTGGTGAGGATTCTTAGAGAAGGTAATGATGAGGCAAAGGCTTCTGCGGCCGATGTGATGTGGGATCTGTCGGGTTACAAGCATTCAATGTCTGTAGTCAGGGATTCAGGTGCAATTCCTATTCTTGTTGAGCTTTTGGAGAGTGGGAGTGAAGATGTGAAGGTGAATGTTTCTGGGGCATTTGCTCAACTGAGCTATGATGGAACTGATAGAATGTCACTTGCTGAGGCAGGGGCGATTCCAATTCTCATTGACTTGATGAATGATGTTGATGAGGTTGAGGAATTAAGGGATAATGCTACAGAGACTCTTGTCAATTTTTATGAAGATCCATTGTATCATGATAGAGTGTCCGATGCAATTAATGTTTCTTCATTCAGAAATATGCAGAATAGGTTAGTTCATATTCGTGCATCCAATGAGCACATGGCTAGATCTTTGAGAAGAATGAGCGTTGAGCAGCTCACATGGAACCCAGATGTTGTATAA 1089 0.438 MRLLPHSDGRMQKVLIKCLLVIVSFCNASRTVVATNGGVEVIIGLLSSCTNDTRRYLLEILSVLALRRDVRKALTRLRALHYVVEAASFGSIVSRERACQAIGLLGVTRQTRRMLVELGAIPVLVSLFRDGEHSTKLVAGNSLGVISAHVDYIRPVAQAGAIPLYAELLEGPDPSGKEIAEDVFCILAVAEANAVEIAGHLVRILREGNDEAKASAADVMWDLSGYKHSMSVVRDSGAIPILVELLESGSEDVKVNVSGAFAQLSYDGTDRMSLAEAGAIPILIDLMNDVDEVEELRDNATETLVNFYEDPLYHDRVSDAINVSSFRNMQNRLVHIRASNEHMARSLRRMSVEQLTWNPDVV* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00711 362 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4 201 319 - -
Phac6g00711 362 Gene3D - 185 330 IPR011989 -
Phac6g00711 362 SUPERFAMILY ARM repeat 2 309 IPR016024 -
Phac6g00711 362 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 237 279 IPR000225 GO:0005515
Phac6g00711 362 Coils Coil 283 303 - -
Phac6g00711 362 Pfam Armadillo/beta-catenin-like repeat 232 265 IPR000225 GO:0005515
Phac6g00711 362 SMART arm_5 26 66 IPR000225 GO:0005515
Phac6g00711 362 SMART arm_5 267 309 IPR000225 GO:0005515
Phac6g00711 362 SMART arm_5 149 189 IPR000225 GO:0005515
Phac6g00711 362 SMART arm_5 108 148 IPR000225 GO:0005515
Phac6g00711 362 SMART arm_5 226 266 IPR000225 GO:0005515
Phac6g00711 362 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 278 307 IPR000225 GO:0005515
Phac6g00711 362 Gene3D - 1 184 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00711 Phac-Chr6 11834228 11836445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00711 45 292 U-box Gene Family AT1G23030 21.875 1.29e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00711 - - pvu:PHAVU_006G053700g 690.649