Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00705 ATGCAAACATCTCAGAATCATAAAATTTCTTATGGCTCTGGTGGGTTCTATGTTGAGCCTGTGCAAAATTTGGAGTCATATTGCTTACCATCAAGTGAGAACATAGACAATTACTCTTCCTCTGATAACAGCAGCCAAACAAATTACCCTTCAGTCCAAACTTTAGATCAATATCTCACCCTTGAATCTGCTTCCACAAGCAACAGTTTCCCTTGCCAAAATTCTCCACCTGCTCTCAGTTTCTCATCAAACAATAGCCCGTTGTCAAACCTAGAGTCAAATTCATATGTGTTAAGGCCACAGCATTCTCTTGAAATTGCTAATGGCCTACCAGAGAATGATTCTTACCCGATTCTTGACCTTGATGAGCTGACACATAAGATAAGAGAACTGGAAACTGCTATGCTGGAACCTAACGCAGATATGCTAGATATCTATGGTGCTATAATGCCAGGAGAAGCTGATTCAATTTTGTTAGAGTCTGAGAAGTGGAAGGAAGTGATGGAGATGGTATCCAGAGGGGATTTGAAAGAGATGCTTTATACTTGTGCAAAGGCAATGGCTGTGAAGGATATGGTGACAACTGAATGGATGATGTCAGAGTCGCGTAAGATGGTTTCTGTTTTGGGCAATCCAATTCAGCGGTTGGGAGCATACATTGTGGAGTCTCTTGTGGCAAGGATGGCTGCTTCAGGAAGCACAATCTACAAATCCTTGAAATGTAGTGAGCCTACTGGTAATGAACTACTTTCATACATGCATGTACTCTATGAAGTTTGTCCATACTTCAAGTTTGGATACATGTCAGCAAATGGAGCAATTGCCGAAGCTCTGAAGGACGAAAGTGAAGTCCACATAATAGACTTTCAGATTTCCCAGGGAACTCAATGGGTGAGCCTGATTCAGGCTCTTGCTCGCCGGCCCGGAGGACCACCAAATATCCGAATATCGGGTGTTGATGACTCCTTTTCATCTTATGCACGGGGAGGAGGACTTGATATTGTTGGGAAAAGGTTATCAGCACTTGCAGAGTCATGTAATGTACCCTTTGAGTTCAATGCTGTGAGAGTACCTGCTTCTCAAGTGCAACTTAAGGACCTTGAACTTCGCCCTTATGAAGCTGTGGCTGTGAACTTTGCCATTATGTTGCACCATGTGCCTGATGAAAGTGTGAACGGCCACAATCATCGCGATAGGTTGTTGAGATTGGCCAAGCACTTGTCTCCTAAAGTGGTGACTCTTGTTGAGCAAGAATTTAACACCAACAATGCACCATTCTTGCAGCGATTCGTTGAGACGATGAACTACTACTTGGCTGTTTTTGATTCAATTGATGCTGCTCTTCCAAGGGAGCACAAAGAGAGGATTAATGTGGAGCAGCACTGTTTGGCTCGTGAAGTTGTCAACTTAATAGCATGTGAAGGAGAAGAAAGAGTTGAACGTCATGAGCTTCTGAATAAGTGGAGAATGCGTTTCACACAGGCTGGATTTGCGCCTTATCCACTGAACTCTGTTATTAATTCTTCAATCAAGGATCTTCTCCAGACCTACCATGGTCATTACACTCTGGAAGAGAAAGATGGTGCACTATTTCTTGGTTGGAAGAATCAAGTTCTTATTGCCTCTTGTGCTTGGAGATGA 1641 0.4302 MQTSQNHKISYGSGGFYVEPVQNLESYCLPSSENIDNYSSSDNSSQTNYPSVQTLDQYLTLESASTSNSFPCQNSPPALSFSSNNSPLSNLESNSYVLRPQHSLEIANGLPENDSYPILDLDELTHKIRELETAMLEPNADMLDIYGAIMPGEADSILLESEKWKEVMEMVSRGDLKEMLYTCAKAMAVKDMVTTEWMMSESRKMVSVLGNPIQRLGAYIVESLVARMAASGSTIYKSLKCSEPTGNELLSYMHVLYEVCPYFKFGYMSANGAIAEALKDESEVHIIDFQISQGTQWVSLIQALARRPGGPPNIRISGVDDSFSSYARGGGLDIVGKRLSALAESCNVPFEFNAVRVPASQVQLKDLELRPYEAVAVNFAIMLHHVPDESVNGHNHRDRLLRLAKHLSPKVVTLVEQEFNTNNAPFLQRFVETMNYYLAVFDSIDAALPREHKERINVEQHCLAREVVNLIACEGEERVERHELLNKWRMRFTQAGFAPYPLNSVINSSIKDLLQTYHGHYTLEEKDGALFLGWKNQVLIASCAWR* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00705 546 ProSiteProfiles GRAS family profile. 167 546 IPR005202 -
Phac6g00705 546 Pfam GRAS domain family 176 546 IPR005202 -
Phac6g00705 546 MobiDBLite consensus disorder prediction 66 85 - -
Phac6g00705 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 126 541 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00705 Phac-Chr6 11778143 11782350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00705 1 546 GRAS Transcription Factor Family AT1G50600 56.703 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac6g00705 GRAS 4.4e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00705 - - gmx:100785400 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g00705 6 11778143 11782350 Phac8g03713 8 43546460 43549552 PCT