Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00704 ATGGACGCCGGCGAAGCTCACTCCGACGATCCGAATCGACCTGGGTCGAGGCCCAATTCCACCGCCGAGGCTGCTCCGGCCGGCGGCGGCGCGAGGTACAAGCTCATGTCGCCGGCGAAGCTCCCGATCTCACGCTCGCCGTGCGTCACGATTCCGCCGGGGCTCAGTCCGACTTCGTTTCTCGAGTCACCGGTGCTGCTCTCCAACATGAAGGTGGAACCTTCACCGACCACAGGATCCCTTTTTATGCTTCATCAATCAGCTCATGCTTCTGTGACTTCTGCTGCATCTGCTTCATTTCCTGTAACCTCTGCATGCTTCAATACCAATACAGTTGATGACCGAAAACCCAGCTTCTTTGAGTTTAAACCGCACAGTAGATCAAATATGGTTCCTGCAGACCCTGACAATCATGCAAGTGAAAAATGTACTCAAATAGATGGTCAAGGAAAAGGTCAACCTTTTGATTCATCATTAGTGAAAAGTGAGATAGCTGTCCCTTCAAATGAATTAAGTCTATCATCACCTGTTCAAATTGTTAGCTCAGGAGCTAATACCCGTGTCGAAGGTGATTTGGATGAACTGAACCCTAGGAGCAACTTAGCAACTGGGCTTCAAGCATCACAAGTTGACAATAGAGGTAGTGGACTTTCTGTTGCACCTGAGCGAGTATCTGATGATGGATATAACTGGAGAAAGTATGGGCAGAAACATGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTTAAGAAACTATTTGAACGCTCTCATGATGGGCAAATCACTGAGATTATTTACAAGGGAACGCATGATCATCCGAAACCCCAGCCTAACCGGCGTTACTCAACTGGAAGTATCATGACTATGCAAGAAGATAGATCTGATAAAGCTTCTTTCCGAGATGACAAAGGATCCAACATATGTGGCCAGGTGTCTCACCCAGCTGAGCCTGACAGTACCCCAGAGCTATCGCCTGTTGCAACAAATGATGGCGATCCAGAGGGTACAGGATTTTTGTCAAACCGGAATAATGATGAGGTTGATGATGATGATCCCTTTTCAAAGCGAAGAAAAATGGAGCTTGCAAATGCTGACATTACTCCTGTAGTTAAGCCTATTAGGGAGCCACGGGTCGTTGTACAAACTCTGAGTGAGGTTGATATATTGGATGATGGTTACCGCTGGCGCAAGTATGGGCAGAAGGTGGTGAGAGGAAATCCTAACCCTAGGAGTTATTACAAATGCACTAACACGGGGTGCCCCGTTAGAAAACATGTGGAGAGGGCATCTCATGATCCGAAGGCTGTGATAACCACATATGAGGGGAAGCACAATCATGATGTGCCAACTGCAAGGAATAATAGTTGCCATGACATTGCAGGACCAGCAAGTGCTGCTGGGGGACAGACAAGAATTAGGCCAGAAGAAAGTGATACCATCAGCCTTGACCTTGGTATGGGAATTAGCCCGGTTTCGGAAAACACACCAAGCAGTCAAGGGAGAATGATGCTTTCTGAATTTGGTGACAGCCAAGCTCATACCAGCAACTCCAATTTCAAGTTTGTTCATACTTCGGGGCCGCCAGTGTACTTTGGTGTTCTAAATAACAACTCTAACCCATATGGCTCTAGAGAAAATCCAAGTGATAGTGCATCTTTAAACCATTCTGCATATCCCTGCCCTCAGAACGTGGGAAGAATACTAATGGGTCCTTAA 1743 0.467 MDAGEAHSDDPNRPGSRPNSTAEAAPAGGGARYKLMSPAKLPISRSPCVTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLFMLHQSAHASVTSAASASFPVTSACFNTNTVDDRKPSFFEFKPHSRSNMVPADPDNHASEKCTQIDGQGKGQPFDSSLVKSEIAVPSNELSLSSPVQIVSSGANTRVEGDLDELNPRSNLATGLQASQVDNRGSGLSVAPERVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPNRRYSTGSIMTMQEDRSDKASFRDDKGSNICGQVSHPAEPDSTPELSPVATNDGDPEGTGFLSNRNNDEVDDDDPFSKRRKMELANADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNNSCHDIAGPASAAGGQTRIRPEESDTISLDLGMGISPVSENTPSSQGRMMLSEFGDSQAHTSNSNFKFVHTSGPPVYFGVLNNNSNPYGSRENPSDSASLNHSAYPCPQNVGRILMGP* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00704 580 MobiDBLite consensus disorder prediction 142 156 - -
Phac6g00704 580 SUPERFAMILY WRKY DNA-binding domain 390 458 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g00704 580 FunFam WRKY transcription factor 215 285 - -
Phac6g00704 580 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 120 498 IPR044810 GO:0003700
Phac6g00704 580 ProSiteProfiles WRKY domain profile. 393 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g00704 580 SUPERFAMILY WRKY DNA-binding domain 222 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g00704 580 ProSiteProfiles WRKY domain profile. 220 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g00704 580 MobiDBLite consensus disorder prediction 123 156 - -
Phac6g00704 580 FunFam WRKY transcription factor 33 385 451 - -
Phac6g00704 580 MobiDBLite consensus disorder prediction 1 33 - -
Phac6g00704 580 Pfam WRKY DNA -binding domain 226 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g00704 580 Pfam WRKY DNA -binding domain 399 455 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g00704 580 SMART WRKY_cls 225 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g00704 580 SMART WRKY_cls 398 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g00704 580 MobiDBLite consensus disorder prediction 299 365 - -
Phac6g00704 580 Gene3D WRKY domain 218 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g00704 580 Gene3D WRKY domain 383 459 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g00704 580 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00704 Phac-Chr6 11771707 11777564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00704 36 580 WRKY Transcription Factor Family AT4G26640 57.117 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac6g00704 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00704 - - gmx:100781491 1011.91