Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00685 ATGGGTATCTCTCGTGATTCCATGCACAAGAGGCGCGCTACTGGTGGCAAGAAGAAAGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGGAGGCAGCCAGCAAACACAAAGCTGTCAAGCAACAAGACCATTAGGAGGATTAGGGTTCGTGGTGGGAATGTAAAGTGGCGTGCTTTGAGGCTTGATACTGGGAACTACTCTTGGGGGAGTGAGGCTGTGACTCGCAAAACAAGGATTCTTGATGTGGTGTACAATGCATCCAACAACGAGCTTGTTCGGACTCAGACGTTGGTCAAGAGCGCCATTGTTCAAGTCGACGCAGCGCCTTTCAAGCAGTGGTATCTGCAGCATTATGGCGTTGACATTGGTCGCAAGAAGAAGACTGTAGCTTCTGCCAAGAAGGAAGGAGAGGATGGTGAAGCTGCAACCGAGGAGGTGAAGAAGAGTAACCATGTCTTGAGAAAATTGGAAAAGCGAAAACAGAGCCGGGTGCTTGATTCTCACATTGAAGAACAATTTGGAGGTGGTCGCCTTTTGGCTTGTATCTCATCCCGACCTGGCCAATGTGGCCGTTGTGATGGATATATATTAGAGGGCAAAGAGCTGGAATTTTACATGAAGAAGCTTCAGAAGAAGAAGGGCAAGGGTGCTGCTTAA 657 0.484 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTVASAKKEGEDGEAATEEVKKSNHVLRKLEKRKQSRVLDSHIEEQFGGGRLLACISSRPGQCGRCDGYILEGKELEFYMKKLQKKKGKGAA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00685 218 Coils Coil 139 159 - -
Phac6g00685 218 Gene3D - 26 213 - -
Phac6g00685 218 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Phac6g00685 218 FunFam 40S ribosomal protein S8 109 176 - -
Phac6g00685 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
Phac6g00685 218 MobiDBLite consensus disorder prediction 11 26 - -
Phac6g00685 218 CDD Ribosomal_S8e_like 5 197 - -
Phac6g00685 218 FunFam 40S ribosomal protein S8 32 161 - -
Phac6g00685 218 Gene3D Ribosomal protein S8e, subdomain 108 176 IPR042563 -
Phac6g00685 218 NCBIfam ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Phac6g00685 218 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Phac6g00685 218 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00685 Phac-Chr6 11630560 11633178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00685 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.024 4.88e-127 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00685 K02995 - gmx:100527325 388.652