Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00678 ATGTTGGATGAATTCTCAGTTACTGCTCCTGCTGGTTTTCCTGATCATCCTCATAGAGGCTTTGAGACAGTCACATACATGTTGCAGGGAGCTATCACGCATGAAGATTTTGAAGGACACAGGGGGACTGTAGAAGCTGGTGACTTGCAATGGATGACTGCTGGGAGAGGGATTGTGCACTCAGAAATGCCTGTTGCTCAAGGAACCCAAAAGGGTCTTCAATTGTGGATCAACCTTGCTTCCAAATATAAAATGATTGAACCAAGGTATCAAGAAGTGTTGAGTAAGGACATAGCAGAAGCTGAGGATGATGATGGTGTGAAGGTAAGAGTTATAGCTGGTGAAGCAGTAGGGATAAAGTCTCCAATCTTCACAAGGACTCCAACCATGTTCTTGGACTTCTCCCTCAAACCAGGAGGTCACTTGCAGCAACCTATACCAAAATCTTGGAATGCTTTTGTGTATATATTGGAAGGAGAGGGTATCTTTGGAAGCATGAAATCTCAACCTTCAAATTCTCACCATATTCTTCTTCTTGGTCATGGTGATGGCCTAGAGGCATGGAACAAATCTTCTAAGCTCCTTAGGTTCATTTTGGTTGGAGGAGAACCTTTGGGGGAACCTATAGTGCAATCTGGACCCTTTGTAATGAACACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAACTTTACAAACGGGTTTGAGAAAGCAAGAGATTGGAGATCTGAAAACAAAATTAACTAA 753 0.4236 MLDEFSVTAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHRGTVEAGDLQWMTAGRGIVHSEMPVAQGTQKGLQLWINLASKYKMIEPRYQEVLSKDIAEAEDDDGVKVRVIAGEAVGIKSPIFTRTPTMFLDFSLKPGGHLQQPIPKSWNAFVYILEGEGIFGSMKSQPSNSHHILLLGHGDGLEAWNKSSKLLRFILVGGEPLGEPIVQSGPFVMNTQEEIDQTIDDFENFTNGFEKARDWRSENKIN* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00678 250 Pfam Pirin C-terminal cupin domain 131 235 IPR008778 -
Phac6g00678 250 CDD cupin_pirin_C 128 204 - -
Phac6g00678 250 SUPERFAMILY RmlC-like cupins 1 245 IPR011051 -
Phac6g00678 250 PIRSF Pirin 1 244 IPR012093 -
Phac6g00678 250 PANTHER PIRIN-RELATED 1 247 IPR012093 -
Phac6g00678 250 Gene3D Jelly Rolls 99 205 IPR014710 -
Phac6g00678 250 Pfam Pirin 10 77 IPR003829 -
Phac6g00678 250 Gene3D Jelly Rolls 1 231 IPR014710 -
Phac6g00678 250 CDD cupin_pirin_N 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00678 Phac-Chr6 11606161 11609644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00678 1 241 Calmodulin-binding Proteins AT3G59220 60.905 2.42e-110 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00678 K06911 - gmx:100802484 464.922