Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00672 ATGGTGCCACTGAGTTGGATCTCTGAGGGGGTCAGGAATTTGGCTCATGAACATGCACAAGTGGTGCCAATTTCACTTTTTGTGGCTGTTCTCTGCCTTTGTTTGGTCATCGGTTACTTGCTTGAAGAAAATCGATGGGTTAATGAATCCATAGTTGCCATTATAGTAGGAATCTTTGCTGGAATTATGCTGTTATTGATCACCAAAGGAAAGAGTTCTCACATCCTTACATTTAGTGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTGAAGAAGAAACAATTCTTCCATAACTTTTTAACCATCATGATGTTTGGTGTCATCGGTGTTTTCATTTCAACTCTTGTAATTACTTGTGGCAGCTGGTGGATATTCCCCAAGTTGAACTTACTTGGCCTGACAGGACAAGATTTTCTTGCTATAGGAACAATTTTCTCATCAACGGACACAGTTTGTACCCTGCAGGTTCTCCATCAAGATGAGACTCCTTTACTATACAGCCTAGTCTTTGGAGAAGGAGTGGTAAATGATGCCACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGCTTGATGTTTCAAAATTTAGCAGCAAGACATTCCGAGTTATTGGAGATTTCTTGTATTTATTCTTGTTAAGCACTGGTCTTGGAGTTCTAGCTGGCCTCCTCACGTCATATATCTTGAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCGTTGATGATGTTAATGGCATACCTATCCTACATGTTGGCAGAGCTATGTGATCTAAGTGGAATCCTCACCGTTTTCTTTTGCGGAATACTCATGTCACACTATGCATGGTATAATGTGACTGAAACTTCAAGAATCACAACCAGGCATGTGTTTGCAACAATGTCATTTATTGCAGAAACCTTCATATTTCTATATGTGGGCATGGATGCCCTTGACATTGAGAAGTGGAAGATGACTCAATTAAGTTATGGAAATTTGCTGGGGATATACAGTTCCTTAATACTATTGATATTGCTTGGGCGGGCTGCATTTGTTTTCCCGCTCTCTGCTGTTGCCAATTATACGAACACACGTGCTAGTTCTGACCGAGCATCACGCATCACTTTCAGACATCAGATAATCATTTGGTGGGCCGGGCTTATGAGGGGAGCTGTCTCCATTGCTCTGGCTTTCAAACAGTTCACATTTTCTGGAGTTACTTCTGATCCAGTTAAAGCAACAATGATTACCAACACCATTATTGTTGTCCTTTTTAGCACACTGGTTTTTGGTTTTCTCACAAAACCATTAATCAGATATCTCCTACCCCACACTGCTACAAGGAAAAACATCAACCATGAAGAATCAGGCCCACAAATTGAGGACTTGAATCTACCTTTGCTATCCCTTGAGGAGTCCGCAGCCACCAACATCAGCCGTGCAAAGGAAAGTTTGTCCATGTTAATAGAAAGTCCTGTGTTCACCATACATCACTATTGGAGGAGGTTCGATGATGCCTACATGAGACCTTTTTTTGGGGGACCTCATCATAACGAGTCACAGTGCTAG 1584 0.4116 MVPLSWISEGVRNLAHEHAQVVPISLFVAVLCLCLVIGYLLEENRWVNESIVAIIVGIFAGIMLLLITKGKSSHILTFSEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMMFGVIGVFISTLVITCGSWWIFPKLNLLGLTGQDFLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSKFSSKTFRVIGDFLYLFLLSTGLGVLAGLLTSYILKALSFGRHSSVREIALMMLMAYLSYMLAELCDLSGILTVFFCGILMSHYAWYNVTETSRITTRHVFATMSFIAETFIFLYVGMDALDIEKWKMTQLSYGNLLGIYSSLILLILLGRAAFVFPLSAVANYTNTRASSDRASRITFRHQIIIWWAGLMRGAVSIALAFKQFTFSGVTSDPVKATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHTATRKNINHEESGPQIEDLNLPLLSLEESAATNISRAKESLSMLIESPVFTIHHYWRRFDDAYMRPFFGGPHHNESQC* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00672 527 NCBIfam sodium/hydrogen exchanger 3 22 462 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Phac6g00672 527 Gene3D - 23 452 IPR038770 -
Phac6g00672 527 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Phac6g00672 527 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Phac6g00672 527 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Phac6g00672 527 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Phac6g00672 527 PANTHER SODIUM/HYDROGEN EXCHANGER 17 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Phac6g00672 527 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00672 Phac-Chr6 11536877 11542493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00672 7 527 Antiporters AT5G55470 70.019 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00672 - - gmx:100813332 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g00672 6 11536877 11542493 Phac6g00672 6 11536877 11542493 ECH