Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00653 ATGGCATCTTCTTCAGACTCATGGATGAAGGAATATAATGAAGCTGTAAAACTTGCTGATGATATCACTGGCATGATTTCTGAACGTAGTTCATTTCCTGCTTCTGGACCAGAAACCCAGCGGCATGCATCTGCTATAAGAAGGAAGATCACGATATTAGGGACCAGGCTTGATAGCTTGCAATCTCTTTTGTCAAAGGTCCCTGCGAAAACTGAGAAGGAAATGAATCGTCGCAAGGACATGCTTGGAAATTTGAGGACTAAAGTTAACCAAATGGCTTCAACATTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGCTTGGTCCAGAAATAAAATCAGATGCAATGAGCAGAACTGTTGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGAACAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACAAAACATATTGCGTTGGCAGTCAATGAAGAGCTGGATCTACACACCAGGCTCATTGATGACTTAGACGAACATGTAGATGTTACAGATTCTCGGCTGAGGCGAGTGCAAAAGAACTTGGCAGTTTTGAACAAACGTACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTATCAGTGATCGGTATAGTGGTTTTGGTTGCTGTCATATGGCTGTTGATCAAATATTTGTAA 690 0.4203 MASSSDSWMKEYNEAVKLADDITGMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQSLLSKVPAKTEKEMNRRKDMLGNLRTKVNQMASTLNMSNFANRDSLLGPEIKSDAMSRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELDLHTRLIDDLDEHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVIGIVVLVAVIWLLIKYL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00653 229 PANTHER SYNTAXIN 39 216 IPR045242 -
Phac6g00653 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 133 195 IPR000727 -
Phac6g00653 229 Gene3D - 135 197 - -
Phac6g00653 229 SUPERFAMILY SNARE fusion complex 124 194 - -
Phac6g00653 229 CDD SNARE_Qc 136 193 - -
Phac6g00653 229 FunFam syntaxin-51 isoform X2 135 197 - -
Phac6g00653 229 Pfam SNARE domain 170 220 IPR000727 -
Phac6g00653 229 SMART tSNARE_6 128 195 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00653 Phac-Chr6 11442961 11447362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00653 1 229 SNARE and Associated Proteins AT1G16240 72.414 6.03e-124 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00653 K08503 - gmx:100794038 415.231