Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00633 ATGGGTGGTGGCGACGCCGGGGAATCCGGTTCAAGGCCGGCGTTTTTCAAAGAACAGAAGTACCGCGGCGTCCGGAAGAGGCCGTGGGGCCGGTTCGCCGCCGAAATCAGAGACCCTTTGAAGAAAGCAAGAGTTTGGCTCGGAACCTTTGACTCTGCCGAGGATGCGGCGCGTGCGTACGACGCGGCGGCTAGAACCCTCCGGGGGCCCAAGGCAAAGACCAATTTCCCCCTCCCTCCGCCGTTCTACCATCCCGATCCGTTCACCGACCATCGGTATTTCGCCGGTTCCGGCGAGCCCTTTCACGATCACCGGCAACCCACCTCAAGCGGCATGAGCAGCACCGTCGAGTCCTTCAGCGGCCCACGCGCCACCGCCCCCAGGGCGACTCCGGTGACCGTCGCCCGGAGGTACCCTCGAACGCCGCCGGTAGTCCCCGAGGACTGCCGCAGCGACTGCGACTCCTCATCCTCCGTCGTGGAAGACGGCGACGGCGACAACGCCGCGTCGTCGTTTCGGCGAGAACCCTTGCCGTTTGATCTTAACGTGTTGCCGTTGGAGGATGCCGACGTTCCAAACGGTGGCGTGGATAGTGATATGTTCTGCACCGTTCTTTGTCTCTGA 624 0.633 MGGGDAGESGSRPAFFKEQKYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEDAARAYDAAARTLRGPKAKTNFPLPPPFYHPDPFTDHRYFAGSGEPFHDHRQPTSSGMSSTVESFSGPRATAPRATPVTVARRYPRTPPVVPEDCRSDCDSSSSVVEDGDGDNAASSFRREPLPFDLNVLPLEDADVPNGGVDSDMFCTVLCL* 208
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00633 207 FunFam Ethylene-responsive transcription factor 2 19 78 - -
Phac6g00633 207 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Phac6g00633 207 MobiDBLite consensus disorder prediction 102 173 - -
Phac6g00633 207 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Phac6g00633 207 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Phac6g00633 207 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Phac6g00633 207 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Phac6g00633 207 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 182 - -
Phac6g00633 207 Gene3D AP2/ERF domain 19 78 IPR036955 GO:0003700|GO:0006355
Phac6g00633 207 CDD AP2 19 77 IPR001471 GO:0003700|GO:0006355
Phac6g00633 207 MobiDBLite consensus disorder prediction 103 121 - -
Phac6g00633 207 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac6g00633 Phac-Chr6 11238269 11238892 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00633 17 207 AP2-EREBP Transcription Factor Family AT1G50640 58.937 2.50e-52 166
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac6g00633 AP2 1.4e-14 CL0081
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00633 K09286 - gmx:100782025 306.605
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g00633 6 11238269 11238892 Phac6g00633 6 11238269 11238892 ECH