Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00626 ATGGTAGCTGAATTGCACCACATGAATGCTGAAAATCAACGCTTGAGAGATCAGGTTGATCAGGTGAATGATAAGTATCATGCTCTACACAATCAAATTATGAAAATGATGGAGAAACGACAACAAAAGAATGAGGGTAAGAAAGCTGATATGATTCCAAGGCCATTCTTGGATATTGGAGTTGCTATGAAGGAAGAGAGTTCGCAGCAACATCCCAAGAGAAAACTGCAAGAAAGCAAGAATCAGAAGATTTGCACTACTGAGTTGGAGGCATCTGAAAAAGTTATTCCAAGGTTGCTCTCAAACAGTTCTTTCAAGGATGTTGATGAAGCATCAGAAACCATGTCAATGATCAAGAAAGCTCGAGTATCAGTTCGAGCAAGATCTGTTTCTTCTATGATTTCTGATGGATGTCAATGGAGAAAGTATGGGCAGAAGATGGCAAAAGGGAATCCATGTCCAAGAGCTTATTATCGTTGTTCAATGGGGACTGGTTGCCCAGTTCGGAAGCAAGTGCAAAGGAGTGCAGAGGATCAAAGTGTGTTGATCACAACATATGAAGGGCAGCATAATCATGTACTCCCTCCAGCTGCCAAAGCAATGGCATCCACCACATCTGCAGCTGCATCAATGCTTCTTTCAGGATCAATGCCAAGCTCAGATGGCCTTCTACACCCAAACATATTAGAAAGTGCAACACTTCCATTTTCACAGAACTTGGCAACCCTCTCAGCTTCAGCTCCATTTCCAACTATCACTTTGGATCTCACTCAAAGTGCCACCAATACTTCCTCACAGCAGCTACCACAAGAGGCACCTCAGGATTCTCAACTCAGCCTCATTTCTCCACTTTTGGCTCCAAATCTTTTTTACCACCAAACTAAGCTTTCTAGCTTACATGGCTCTCAGGGAACAGAACCTGCTTCTTTTGCTGACACAGTAAATGCAGCAACAGCTGCTATCACTACAGACCCCAAATTCAGTGCAGCTCTTATGGCAGCCATAACATCAATTATTGGAAGTTCACATCCAGTGGAGACTCAGCATTGCAATAACAAATAA 1062 0.4275 MVAELHHMNAENQRLRDQVDQVNDKYHALHNQIMKMMEKRQQKNEGKKADMIPRPFLDIGVAMKEESSQQHPKRKLQESKNQKICTTELEASEKVIPRLLSNSSFKDVDEASETMSMIKKARVSVRARSVSSMISDGCQWRKYGQKMAKGNPCPRAYYRCSMGTGCPVRKQVQRSAEDQSVLITTYEGQHNHVLPPAAKAMASTTSAAASMLLSGSMPSSDGLLHPNILESATLPFSQNLATLSASAPFPTITLDLTQSATNTSSQQLPQEAPQDSQLSLISPLLAPNLFYHQTKLSSLHGSQGTEPASFADTVNAATAAITTDPKFSAALMAAITSIIGSSHPVETQHCNNK* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00626 353 SUPERFAMILY WRKY DNA-binding domain 131 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g00626 353 ProSiteProfiles WRKY domain profile. 129 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g00626 353 FunFam probable WRKY transcription factor 31 119 196 - -
Phac6g00626 353 Gene3D WRKY domain 119 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g00626 353 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 348 IPR044810 GO:0003700
Phac6g00626 353 SMART WRKY_cls 134 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g00626 353 Pfam WRKY DNA -binding domain 136 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g00626 353 Coils Coil 5 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00626 Phac-Chr6 11156994 11163762 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00626 4 339 WRKY Transcription Factor Family AT4G04450 44.330 2.94e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac6g00626 WRKY 2.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00626 - - pvu:PHAVU_006G047300g 638.262