Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00619 ATGTCGAATTTGCCCCAATCGCTGTCTATGGGTGCCGCCTTCGGTGGCGGCGGTCCACAGTCTTCGTCGAGTGGTGCCGGGTCACAGGGCTCTGGTGCCGGCAAAGATCGGAAGATGGCATCGGCGGAGCAACTGGTGCTGGAACTCAGCAATCCTGAACTCCGAGAAAACGCGCTTCTGGAACTCTCCAAGAAGAGGGAGCTATTTCAAGATCTTGCTCCTTTGTTATGGAATTCTTTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTGTCAATTTATCCTGTTCTTTCACCACCAAATCTTACTCCTGCTCAATCAAATCGAGTGTGTAATGCTCTTGCTCTTCTTCAGTGTGTAGCATCTCACCCGGATACAAGGATGCTATTCCTCAATGCTCATATACCTTTATATCTGTACCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTACTTGAGGCTTACCAGTCTTGGTGTCATTGGTGCGTTGGTGAAGGTTGATGATACAGAAGTTATAAGTTTCCTTCTTTCAACAGAAATAATTCCTCTGTGCTTGCGCACCATGGAAATGGGCAGTGAGCTATCCAAAACAGTTGCAACATTTATTGTTCAAAAAATTCTTTTGGACGATGTTGGCTTGGACTACATTTGTACTACAGCCGAGCGCTTTTTTGCGGTAGGTAGAGTTTTGGGGAACATGGTGGCAGCTCTTGCTGAGCAACCCTCCTCTCGATTACTGAAGCATATCATTAGGTGCTATCTTCGCCTGTCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGCTGTCTACCAGACATGTTAAGAGATGCTACGTTCAGCAGTTGCCTTCGTGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAGTGAATCGAGTTCCTGCACTACAAGCTGGAGGAGGGTTCGATCATATGATTGTGACCTGA 972 0.4619 MSNLPQSLSMGAAFGGGGPQSSSSGAGSQGSGAGKDRKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIVT* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00619 323 Pfam Cell differentiation family, Rcd1-like 45 303 - -
Phac6g00619 323 SUPERFAMILY ARM repeat 47 278 IPR016024 -
Phac6g00619 323 MobiDBLite consensus disorder prediction 1 38 - -
Phac6g00619 323 PANTHER UNCHARACTERIZED 38 306 IPR007216 GO:0006402|GO:0030014
Phac6g00619 323 Gene3D - 34 304 IPR011989 -
Phac6g00619 323 MobiDBLite consensus disorder prediction 16 30 - -
Phac6g00619 323 FunFam Cell differentiation protein RCD1 35 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00619 Phac-Chr6 11095503 11105593 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Phac6g00619 Rcd1 3.6e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00619 K12606 - gmx:100784529 588.186