Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00604 ATGCCCTTTGTGGAGAAAGAAAAATATCATATCCCAAGAAGGTGTAGGTTTCATCCTGACAATGACATATACAGAGATCAGGAGCAGCACAAGTTTCATACAGATATAAATGAATGGCAATGCGGTTACTGTAAGAAAAGTTTCTATGAAGAAAAACATCTCGATCAGCATTTTGATAACAGACATTCCAATTTGCTTAATTTGAATGAAAGCCAGTGCTTAGCTGATGTATGTGGTGCACTGCACTGTGACCATGAAATGAGTTCTGGTTCAAAAAAATCAAAGTGCAATCCTTCCGCTGCTGCAAGAAATAAACATCTATGTGAGAGCTTAGCCGACAGTTGTTTTCCAATTAATGAGGGTCCTGTGACAAGCCGACTTCATGAATTGTTCTTGCACCAATTCTGTGATGCTCACAGCTGCACTGGAAGTAGGCAGCAACCTTTCTCAAGAGGGCGCCGGAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACTGCTGCTACTATACTATCTCTACATTTACTTATATCAGAGAGGAATGAAAAAGGAAACTCAAGTGCTGAAGCGCATCTCACAAACCAGCAGAAAGAAAAAGCCATCCTAA 621 0.3994 MPFVEKEKYHIPRRCRFHPDNDIYRDQEQHKFHTDINEWQCGYCKKSFYEEKHLDQHFDNRHSNLLNLNESQCLADVCGALHCDHEMSSGSKKSKCNPSAAARNKHLCESLADSCFPINEGPVTSRLHELFLHQFCDAHSCTGSRQQPFSRGRRKKTNVFYIFVSILLVILLLLYYLYIYLYQRGMKKETQVLKRISQTSRKKKPS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00604 206 ProSitePatterns Zinc finger C2H2 type domain signature. 41 62 IPR013087 -
Phac6g00604 206 PANTHER ZINC FINGER PROTEIN-RELATED 1 205 - -
Phac6g00604 206 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 64 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00604 Phac-Chr6 11005962 11010353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00604 1 206 C2H2 Transcription Factor Family AT5G63280 60.680 1.07e-90 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac6g00604 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00604 - - gmx:100527694 369.777