Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00593 ATGGAGGGTATGGCAAGCAGTAATGATGTTGCCAATGGTGAGAATGGGTTGCTGGTAATGATTGGTGGTGACAATGAATTTCGTGGCGGCGGTGGCGGTGAGGGTGGTGGCAATGTGGAGGAGGTGGCTCTGAAGAAGGGTCCCTGGACAACTGCAGAAGATGCCGTTCTCATAGATTATGTGACAAAACATGGTGAAGGGAATTGGAATGCAGTGCAGAAGAACACAGGGTTGAATAGGTGTGGGAAGAGTTGTAGGCTTAGGTGGGCTAACCATTTGAGGCCCAATTTGAAGAAGGGTGCGTTCTCTCCCGAGGAAGAGAAGCTCATTATCGACCTTCATTCACAATTTGGCAACAAATGGGCCAGAATGGCTGCTCTGTTGCCTGGGAGAACAGACAATGAGATAAAGAACTATTGGAACACAAGGATCAAACGTCGCCAAAGACAAGGTCTCCCTCTCTATTCAGAGGAGCATGATAACCATTGTTCCACAACACCAACCCCTTCCCCATGCCTCACACAAACAGCATCAAGCCCTAATAACACTCTCACAAACTATGAGTTCTTCAACCAAAACCACCACCAACACTACCATCAACAACAACAAAACCACCAACAACAACACCAACCTCTATCTCCAACTGCACCTCATCATTCCCCTCTCAGTTCCCCTCTCCAACACAGACAACCCTTCACCTCTTCTTCACCTCTCAATTTCTTAGACCATTCACCTCTTCCACTCTCCTCCTCTTCACCCTCCCCTCTCTCCTTCACCTTCCAAAGACCAGAACCAGTGCTATGCACCCCTCTTCGCTTCAAACGCTACCGTGCCTCTCCAAGCTACAACCCCCTCCCCGACCTTCCTCTCACCAACCAATTCCCTCATCTTGATGGATTCAGGTTCCCAGTTTCTTCAGGTTTCTCTCCGTTTTTTCAACCCTCTTTCTTAGAATCTGACCGAGGCATTTCTTCTTCCTCACCTTTCCAACCCAAGTTGGAGCTCCCTTCAAACCAGTTCTACAAACCCCCCCAAGAGCAAGACATCAAGCTTGACATTGATTTCAGTGATCCTTCTTTTCAAACTAGTAGCGGCTTGCTGGGGGATCTTCTCTTGGAGGCTCAGGCTTTGGCTTCGGGCCAGAACTCAAAGAAACGAACCTACTTGAGTTTAAATGAGGGAAATGATATGTTTGATGCATGCCAAAGCTTTGAGGACTTTCCATCTAGCTCTCTCTACTGGCCTTCTTCTGCATCAGCACCAAAAGCAAAGGAAGAGGCACCTGACTTGAGCAAATTCATGAATGAGGATTTGTCATCATTGCTGACAGTGATTCCATCTTCCAACACACAAGGTCATGAGTGGCTCAATAATGGTGTCCCAGAAGGGTCCAATGTCCAACCTTCTGGTAGTGGCATGACAGATGACAATTTTGGAGTTGATATGAAGCCAGTAGCTTCCTTGTTTCCTCTCAGCAATACCACAAACCATAATGAAAACCAAGGCTGCTACACTTGGGACAATTTGCCTGGTCTCTGCTAA 1542 0.4741 MEGMASSNDVANGENGLLVMIGGDNEFRGGGGGEGGGNVEEVALKKGPWTTAEDAVLIDYVTKHGEGNWNAVQKNTGLNRCGKSCRLRWANHLRPNLKKGAFSPEEEKLIIDLHSQFGNKWARMAALLPGRTDNEIKNYWNTRIKRRQRQGLPLYSEEHDNHCSTTPTPSPCLTQTASSPNNTLTNYEFFNQNHHQHYHQQQQNHQQQHQPLSPTAPHHSPLSSPLQHRQPFTSSSPLNFLDHSPLPLSSSSPSPLSFTFQRPEPVLCTPLRFKRYRASPSYNPLPDLPLTNQFPHLDGFRFPVSSGFSPFFQPSFLESDRGISSSSPFQPKLELPSNQFYKPPQEQDIKLDIDFSDPSFQTSSGLLGDLLLEAQALASGQNSKKRTYLSLNEGNDMFDACQSFEDFPSSSLYWPSSASAPKAKEEAPDLSKFMNEDLSSLLTVIPSSNTQGHEWLNNGVPEGSNVQPSGSGMTDDNFGVDMKPVASLFPLSNTTNHNENQGCYTWDNLPGLC* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00593 513 ProSiteProfiles Myb-like domain profile. 94 144 IPR001005 -
Phac6g00593 513 ProSiteProfiles Myb-like domain profile. 41 93 IPR001005 -
Phac6g00593 513 CDD SANT 48 93 IPR001005 -
Phac6g00593 513 FunFam Transcription factor GAMYB 101 147 - -
Phac6g00593 513 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 93 IPR017930 -
Phac6g00593 513 Gene3D - 101 147 - -
Phac6g00593 513 MobiDBLite consensus disorder prediction 157 178 - -
Phac6g00593 513 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 148 IPR017930 -
Phac6g00593 513 CDD SANT 101 142 IPR001005 -
Phac6g00593 513 Gene3D - 45 98 - -
Phac6g00593 513 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 32 464 - -
Phac6g00593 513 SMART sant 98 146 IPR001005 -
Phac6g00593 513 SMART sant 45 95 IPR001005 -
Phac6g00593 513 MobiDBLite consensus disorder prediction 159 178 - -
Phac6g00593 513 MobiDBLite consensus disorder prediction 195 246 - -
Phac6g00593 513 Pfam Myb-like DNA-binding domain 99 142 IPR001005 -
Phac6g00593 513 Pfam Myb-like DNA-binding domain 46 93 IPR001005 -
Phac6g00593 513 FunFam MYB-related transcription factor 45 98 - -
Phac6g00593 513 SUPERFAMILY Homeodomain-like 44 140 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00593 Phac-Chr6 10953044 10955333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00593 29 513 MYB Transcription Factor Family AT4G26930 37.228 2.17e-67 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac6g00593 Myb_DNA-binding 1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00593 - - vun:114188481 768.844