Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00486 ATGGTAACCATTGTTGCTTCATACAGTGTTCTTCCATGTGAAGAAACTCCCAAAGGTCATTTATGGTTAGCAGATAGTGACCAAGTTGTGCGTTCAGGTCACACACCCACCATCTATGTATACGAAGCAAAACACAGCCGTGACACCAATGAGAGGTTGAGGAAGTCACTTGGTGAGATTTTAGTGCACTACTATCCAGTAGCTGGAAGGTTGAGCTTAGCAGAAGATGCTCGAATTCAACTGGATTGCAATGCCAAGGGAGCCACGTTTATTGAAGCTGAAACCACAAAATCAATGGCTGATTATGGAGACTTTTCACCTGGTGTTGTCGCTGAGCTTGTTCCAAAGATTGATTACACTCAACCCGTGGAGGAGATTCCTTTGTTGCTTGTGCAATCCACAAGATTCCCTGGTGGTAAAGGCTTTGTCATTGGAGTTGCTGTGTGTCACGTTTTGGCTGATGGGCTAGGTGGCATTCAGTTCATCAATTCATGGGCAAAACTGGGGCGTGGAGAGAAACTGGAGCCACATGAATTGCCATATCTTGATAGAACAATACTCAAACACCAACACTCGTCAGCATCACCGTCACCATGCTTTGATCACCCCGAGTTGAAGCCTCTACCACTCAAACTAGGAAGCTCTGACATCAATGCTGAGCAGAAGAAGAAGACAAAAGCTGTGTTACTGAAACTAACGCGACAACAAGTGGAGAAGCTGAAGAAGGAGGCCAATGAACAACCCTTGCAAGAAGGGGTTAGAGCTTATAGCAGATTTGAAGCTCTTGCTGGTCATATATGGAGATCTGCATCTAAGGCTCGTGAACTTGAAGAGAAGCAACCAACCGTAGTTCGTTTCAATGCTGATATCCGCAGCAGAGTAATTCCTCCTCTTCCTAGGAACTACTATGGGAATGCTTTGGCAGCAACAGTGACACCCAAATGCTATGTTGGAGAGATTGTGTCAAAGCCTTTGAGCTATGCTGCACAAAAAGTAAGAGAAGCGATTGAAAAGCTTACTAATGAGTACATAAGGTCACAGCTGAAGAATGTGTTGGGTGAGGAGCAGTTAGATTGCATAAGGCGTTTGTTCATGGGAGAAGGAGAGCGTAGGAATGCCCCTTTTGCAGGGAACCCAAATCTTCATATCACAAGCTGGATGAGCATGCCATTGTATGAAGCAGATTTTGGATGGGGAAAGCCTGTGAATTTTGGGTTGGCATATGTGTTTGCACAAGATAGAGCAGTGATTATTCTAAGTCCACATGGTGATGGGTCCATTGTTATTTCCATGACCTTCCAAGAAGAACATTTGGAACTTTTCAAGAAATTCTTCTATGAGACCATATGA 1350 0.443 MVTIVASYSVLPCEETPKGHLWLADSDQVVRSGHTPTIYVYEAKHSRDTNERLRKSLGEILVHYYPVAGRLSLAEDARIQLDCNAKGATFIEAETTKSMADYGDFSPGVVAELVPKIDYTQPVEEIPLLLVQSTRFPGGKGFVIGVAVCHVLADGLGGIQFINSWAKLGRGEKLEPHELPYLDRTILKHQHSSASPSPCFDHPELKPLPLKLGSSDINAEQKKKTKAVLLKLTRQQVEKLKKEANEQPLQEGVRAYSRFEALAGHIWRSASKARELEEKQPTVVRFNADIRSRVIPPLPRNYYGNALAATVTPKCYVGEIVSKPLSYAAQKVREAIEKLTNEYIRSQLKNVLGEEQLDCIRRLFMGEGERRNAPFAGNPNLHITSWMSMPLYEADFGWGKPVNFGLAYVFAQDRAVIILSPHGDGSIVISMTFQEEHLELFKKFFYETI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00486 449 Pfam Transferase family 1 447 - -
Phac6g00486 449 Gene3D - 1 207 IPR023213 -
Phac6g00486 449 Coils Coil 329 349 - -
Phac6g00486 449 Gene3D - 214 448 IPR023213 -
Phac6g00486 449 Coils Coil 227 247 - -
Phac6g00486 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00486 Phac-Chr6 9886861 9888672 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00486 2 447 Monolignol Biosynthesis Gene Families AT5G48930 35.635 1.15e-96 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00486 K13065 - gmx:100779814 683.33