Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00468 ATGTGTCCAAATGATGCTGATGCAACAAAGAAATTGAAGGAATGTGAAAAAGCAGTTATGAAGCTTAAATTTGAAGAAGCAATTGCCGCACCTGAGTCTGAAAGGCGTTCAATAGCTGAATCGATAGATTTCCATACAATAGGAAAGGGCCGCAATTCTTCGGTGCCCACCGAAGTGGCCATAGCAGCAGTGACAGTAGCAGTAATGGCAGCAGCGGTGATGTTGTTCAGGACATCAAAGACCACAATAGTAATTGCAATTGTGGTTGGTTTGCTGTTGCTCCTCGGGGCTTATTGGTGGAGTGGCCACAATACTGATGTGGAGCCACAATATTCAGGAGCAAGAATAGAAGGGGATGTTGTTACTTTGGATTTTGTGAAAAAAATGATGGAAGATTTCAAGAACCAGAAGTTCTTACATAAACGGTATGCATTCCAGATTGTATTGCAAACAAGAGAAATTTTGCAATCTTTGCCTTCTCTTGTTGACATACATGTTCCTAATGGCAAACATTTTACTGTTTGTGGTGATGTGCATGGTCAGTTCTATGATCTTTTGAATATTTTTGAGCTTAATGGACTTCCTTCAGAAGAGAATCCGTATCTATTTAATGGTGACTTTGTGGATAGGGGATCTTTTTCATTGGAAGTTATCCTGACCTTGTTTGCATTTAAGTGCATGTCTCCATCAGGGCTGATGTGTGAAATTCTTTGGAGTGATCCACAACCTCTTCCTGGAAGGGGCCCAAGCAAGCGTGGTGTGGGCCTTTCTTTTGGTCCAGATGTTACAAGAGAGTTTTTGCAGGAAAATAATTTAGATTTAATTGTGAGATCTCATGAAGTAAAGGATGATGGTTACGAGGTTGAACATGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGATGGGTAACAAAGGTGCCTTTATCCGATTTGAAGCACCAGATTTGAAACCTAACATTATCACATTCTCAGCTGTGCCACACCCTGATGTCAAACCAATGGCTTATGCAAACAACTTCCTCAGGATGTTCTCATAA 1053 0.4074 MCPNDADATKKLKECEKAVMKLKFEEAIAAPESERRSIAESIDFHTIGKGRNSSVPTEVAIAAVTVAVMAAAVMLFRTSKTTIVIAIVVGLLLLLGAYWWSGHNTDVEPQYSGARIEGDVVTLDFVKKMMEDFKNQKFLHKRYAFQIVLQTREILQSLPSLVDIHVPNGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSGLMCEILWSDPQPLPGRGPSKRGVGLSFGPDVTREFLQENNLDLIVRSHEVKDDGYEVEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNIITFSAVPHPDVKPMAYANNFLRMFS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00468 350 SMART pp2a_7 139 332 IPR006186 GO:0016787
Phac6g00468 350 PRINTS Serine/threonine phosphatase family signature 201 228 IPR006186 GO:0016787
Phac6g00468 350 PRINTS Serine/threonine phosphatase family signature 171 198 IPR006186 GO:0016787
Phac6g00468 350 Pfam PPP5 TPR repeat region 104 163 IPR013235 -
Phac6g00468 350 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 2 230 - -
Phac6g00468 350 SUPERFAMILY Metallo-dependent phosphatases 120 344 IPR029052 -
Phac6g00468 350 Pfam Calcineurin-like phosphoesterase 171 227 IPR004843 GO:0016787
Phac6g00468 350 Gene3D - 230 349 IPR029052 -
Phac6g00468 350 Gene3D - 99 229 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00468 Phac-Chr6 9636966 9648419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00468 117 229 Calmodulin-binding Proteins AT5G63870 31.452 1.51e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00468 K04460 - gmx:100820099 416.772