Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00453 ATGGACGGTGCGACACAATCCGCCGCCGCCGCCGCCGCGGGAGGACCGGCGCCGTTTCTTCTGAAGACATATGACATGGTGGACGATTCCTCCACCAGCGACATCGTTTCGTGGAGCTCATCCAACACCAGCTTCGTCGTGTGGAATCCGCCGGAGTTCGCTCGCCTTCTTCTACCGACCTATTTCAAGCACAACAACTTCTCCAGCTTCATCCGCCAGCTCAATACCTATGGTTTCCGAAAAATACATCCAGAGCGATGGGAATTTGCTAATGAGGAGTTTGTGAAAGGTCAGAAGCATCTTCTTAAGAATATACATCGCAGGAAACCTATCCACAGTCATAGTCATCCTCCGGGTACTATTGTAGATCCAGAAAGAGCAGCATTTGAGGAAGAAATCGAGAAACTTTCCAATGAGAAATCTTCTCTTGAGTCCAATATTCATAATTTCAGACAACATCAGTCAACAGCAAAGCTTCAACTAGAAGATTTTCTACAGCGGTTAGATGGTACTGAAAAGAGGCAGAAACAATTGCTGAACTTCTTTGAGAAGGCTCTTCAGAATCCTAGTTTTGTTGAACATCTTTCACGCAAAATTGAGTCCATGGATTTATCAGCATATAATAAGAAGAGGCGATTGCCTCAAGTTGATAATGTTCAACCGGTTGCAGAAAGTAGCTTCGTGGACAGTCAAAGCAATTTTAGAATGGAATTTGGAAATGTCTTCCATCAGGATTTCTCGAATAAACTCAGACTGGAATTGTCACCAGCTGTGTCAGATATGAACTTGGTATCACGTAGCACACAGAGTTCAAATGAAGATGAGGAAAGTCCACAGAAAAAACTGTCTGAAGTGGAACCAAAAGGAATTCAGACAAGAACAGCTCTTACATTTGCACCTGAAACATTAGAACTTGCGGATACCGGGACTTCTTTTACTTTTAAGATGGATTCATGTTTATCGCTAAAAGCAGCAACTGCTGAGAGCTCAAAACTGATCTCTTTGGAGCCAAGTAGTGAAGAAGGCGATAGTCATATATCCTGCCAATTAAACTTAACTCTGGCATCTTGTCCATTGCAAGTAAATAGAAATTCTTATTTAGCCAGATCACCCCAAATCGACTGTCAAGAAATTGGCAAATTGGCAGAATCCAGATTTTTTTCCAGTGGCAAAGAATCTGAAAGTGGTGTTTCCTCAAACCAAAATGCAGCTGCTGAAGCTACCAATTTAGCTTCACCACAGGAGGCTCCAAATAACAACAACCAAGTTAATCCAGCTCCTCCAGACAAGGTGAATGATGTTTTCTGGGAACAGTTTCTTACCGAAAGGCCAGGCTGTTCTGACAATGAAGAGGCAATATCCAACTACAGAGCCAACCCATATGATGAACAAGATGAAGGACGGTCAGCTCATGGAATATCTAGAAACATTAAGAACATGGACCAACTCAGACTTTGA 1458 0.4287 MDGATQSAAAAAAGGPAPFLLKTYDMVDDSSTSDIVSWSSSNTSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIHPERWEFANEEFVKGQKHLLKNIHRRKPIHSHSHPPGTIVDPERAAFEEEIEKLSNEKSSLESNIHNFRQHQSTAKLQLEDFLQRLDGTEKRQKQLLNFFEKALQNPSFVEHLSRKIESMDLSAYNKKRRLPQVDNVQPVAESSFVDSQSNFRMEFGNVFHQDFSNKLRLELSPAVSDMNLVSRSTQSSNEDEESPQKKLSEVEPKGIQTRTALTFAPETLELADTGTSFTFKMDSCLSLKAATAESSKLISLEPSSEEGDSHISCQLNLTLASCPLQVNRNSYLARSPQIDCQEIGKLAESRFFSSGKESESGVSSNQNAAAEATNLASPQEAPNNNNQVNPAPPDKVNDVFWEQFLTERPGCSDNEEAISNYRANPYDEQDEGRSAHGISRNIKNMDQLRL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00453 485 PRINTS Heat shock factor (HSF) domain signature 19 42 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac6g00453 485 PRINTS Heat shock factor (HSF) domain signature 57 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac6g00453 485 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac6g00453 485 MobiDBLite consensus disorder prediction 263 287 - -
Phac6g00453 485 SUPERFAMILY "Winged helix" DNA-binding domain 15 108 IPR036390 -
Phac6g00453 485 MobiDBLite consensus disorder prediction 390 430 - -
Phac6g00453 485 Gene3D - 13 109 IPR036388 -
Phac6g00453 485 SMART hsfneu3 15 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac6g00453 485 MobiDBLite consensus disorder prediction 390 427 - -
Phac6g00453 485 Pfam HSF-type DNA-binding 19 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac6g00453 485 MobiDBLite consensus disorder prediction 273 287 - -
Phac6g00453 485 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 279 IPR027725 -
Phac6g00453 485 Coils Coil 126 153 - -
Phac6g00453 485 MobiDBLite consensus disorder prediction 445 485 - -
Phac6g00453 485 FunFam Heat shock transcription factor 1 12 109 - -
Phac6g00453 485 ProSitePatterns HSF-type DNA-binding domain signature. 58 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00453 Phac-Chr6 9406708 9411536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00453 1 485 HSF AT4G13980 52.727 3.43e-166 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac6g00453 HSF_DNA-bind 1.6e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00453 K09419 - gmx:100816484 812.372