Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00443 ATGCTTCACTCAACATGCTTCTTCTCACTTTTCCTATCATTAACGCTTCACTTATCAGGGACCAATTCCGCCAAGATGACTTTAATCAACCAATGCAACTACACGGTGTGGCCGGCTTTGAGCAGTTCTGATAACGTCAATCTTTCAACCACCGGGTTCGTTTTGCCAAGCGGCCAAAATTCCAGTGTCAACGTACCCGTGAATTGGAACGGTCGAATCTGGGGCCGCACACTCTGCACCACCGACAAAATTACCGGCAATTTCTCATGTTTTACCGGCGACTGCAATTCCGGCAAGATAGCATGTGACGGTGGAGGGTCAGCACCGAACACGCTGGTGGAGTTCGACTTAGACAGCAAAAACGGGCTTGACTTTTATGACGTGAGCTTGGTGGAGGGGTTCAACATGCCGGTGATTGTTGTTCCCGTGAGTGATTCAGGCAGCAACTGTGAGAGCACGGGGTGCGTGAAGGATTTGAACGCAGTGTGTCCGACGGAGCTAAACTTAACCAGACATGAGGAAGTGGTGGCATGTCAGGACCCTTGCAGTGTGTTCAGAACGGAGGAGTATTGTTGCGTTGGAAACCGTTCCTCGTGCGAACCAACTACGCTCTCCAATTTTTTCAAGACGGAATGTCCCCAAGCCTACAGCTACCGGAAAGACGACACAACCAGCACCTTCACCTGTTCCACTCCTGCAGACTACAACATTGTCTTCTGCCCTAAATCTACCAATGCCAGTCGAAGGGTTGGTGACTCACTCATTGCTGGTAATGAGACATCCAAGTGGCTTTCCCCTTCAGGTGTTTTTGCATTTGGCTTCTATCAACTTCCTAATAAGCTTTTCTTACTAGCTATATGGTACAACCAGATACAAAATACAACCATCATTTGGTCTGCAAATGGAGACAACCTTGCTCCAATAGGATCAAAGTTAGAACTAAACGATTCTCGTGGATTAGTACTAAAAACCCCTCAAGGTGTAGACTTATGGACACCAAGTTTTACATCAGGTACAATTTTTAATGGTCTTATGAATGATGATGGAAATTTCCAACTATTAGATCAAAACTCTGTGTCATTATGGGATAGTTTCGCTCATCCAACTGACACATTGCTACCTACTCAAGTATTAGAGTTAGGTGGAGAACTCTCCTCTCGACAAGGAGAGTTCAACTTTTCAACTGGAAGGTTCAAACTTCAACTACAAGAGGATGGGAATCTTGTGCTTAAGCTTGTAAATTTGGATAAGCCTTACTTTCATACTGGCACTGCTGATGAAAAAAACAAAACAAATGTTGGCATTAAATTTGTATTTGATAAATCAAGCTTCTTGTATGTACTGAAGAAAAGTGGGGAAAAGTTTGAAGTTAGCCCATCAAACGAGAAGATCTCTTCTAATGATGTCTACTACAAAGCAACAATCAATTATGATGGAGTTTTGACTGTATCATATCACCCCAAAGATCCAAAAAAAGAACAAAGGTGGGTCACTTCAACAGCAAAACCAGAAAATATTTGTCTGGATTCTACTTTTAAGGATGTTGGAGGAGTTTGTGGGTTTGATAGCACATGCAACCTGAAAGATGACATGAGGCCCATGTGTAACTGCCCAGAGAGATATTCTCTAATTGATTCAAATAACATGTATGGTGGTTGCATATTGACCCCTTTCCAAGAGAAAAAGGTGAATAAAGATCATGAAACCTTGATCATCGTGATATCAGTTCTTTTGGGCTTCTTAGTGTTGGTCATTTTAGTGTTGGTTGGTGCAATGTATTTTGGTTTCTCCTTCAACCGCAAGAAGATCAAAAGTGGTAGAACCAATAATGGTGTCGTTGAGAAAAACTTGCGTAACTTCACCTTCATGGAACTTGTAGAAGCAACGGGTAACTTTAGTGAAGAATTGGGAAGGGGATCTTTCAGCATTGTCTACAAAGGAACAATAGACATGACTAGTTTGGCTGTTAAGAAATTAGACAAGTTGTTTCGAGACAATGACAAGGAATTTCAGACTGAAATGAATGTAATAGGTCAAACTCATCATAGGAATCTGGTTCGTCTACTTGGATACTGCAATGAAGGACAACACAGAATTTTGGTGTATGAGTTTATGAGCAATGGCACTTTAGCAAGCTTCCTTTTCACCCCTTTGAAAGCAAATTGGAGACAACGATTTGAAATTGCCTCTGGGATTGCAAGAGGTCTTGTTTACTTGCATGAGGAATGTTGCACCCAAATCATCCACTGTGACATAAAGCCACAAAATATACTTTTAGATGATCAATATAATGCCAGAATTTCAGATTTTGGATTAGCAAAGCTATTACTGATCAATCAAAGCCACACTGAAACTGGAATTAGAGGAACAAAAGGGTATGTTGCACCAGATTGGTTTAGAAGTTCACCAATCACTCCTAAAGTTGACACTTATAGTTTTGGTGTGATGTTATTAGAGATAATTTGTTGTAGGAGGAATGTAGAAAATGAATTTGTTGATGAAGAAAAAGGGATATTGACAGATTGGGCATATGATTGCTTCAAGACTAGAAGACTAGACATTCTTCTAGAAAATGATGATGAAGCTCTTAAGAACATTAAGAGTTTTGAAAAATTTGTGATGATTGCTCTTTGGTGTATTCATGAAGATCCCTCTCTTAGACCAACAATGAAGAAGGTTTTGCTAATGCTGGAAGGAATTGTTGATGTTTCAATACCCCCAAATCCCTACCTCTATGGTTCTGCAAGTTAA 2751 0.4079 MLHSTCFFSLFLSLTLHLSGTNSAKMTLINQCNYTVWPALSSSDNVNLSTTGFVLPSGQNSSVNVPVNWNGRIWGRTLCTTDKITGNFSCFTGDCNSGKIACDGGGSAPNTLVEFDLDSKNGLDFYDVSLVEGFNMPVIVVPVSDSGSNCESTGCVKDLNAVCPTELNLTRHEEVVACQDPCSVFRTEEYCCVGNRSSCEPTTLSNFFKTECPQAYSYRKDDTTSTFTCSTPADYNIVFCPKSTNASRRVGDSLIAGNETSKWLSPSGVFAFGFYQLPNKLFLLAIWYNQIQNTTIIWSANGDNLAPIGSKLELNDSRGLVLKTPQGVDLWTPSFTSGTIFNGLMNDDGNFQLLDQNSVSLWDSFAHPTDTLLPTQVLELGGELSSRQGEFNFSTGRFKLQLQEDGNLVLKLVNLDKPYFHTGTADEKNKTNVGIKFVFDKSSFLYVLKKSGEKFEVSPSNEKISSNDVYYKATINYDGVLTVSYHPKDPKKEQRWVTSTAKPENICLDSTFKDVGGVCGFDSTCNLKDDMRPMCNCPERYSLIDSNNMYGGCILTPFQEKKVNKDHETLIIVISVLLGFLVLVILVLVGAMYFGFSFNRKKIKSGRTNNGVVEKNLRNFTFMELVEATGNFSEELGRGSFSIVYKGTIDMTSLAVKKLDKLFRDNDKEFQTEMNVIGQTHHRNLVRLLGYCNEGQHRILVYEFMSNGTLASFLFTPLKANWRQRFEIASGIARGLVYLHEECCTQIIHCDIKPQNILLDDQYNARISDFGLAKLLLINQSHTETGIRGTKGYVAPDWFRSSPITPKVDTYSFGVMLLEIICCRRNVENEFVDEEKGILTDWAYDCFKTRRLDILLENDDEALKNIKSFEKFVMIALWCIHEDPSLRPTMKKVLLMLEGIVDVSIPPNPYLYGSAS* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00443 916 FunFam Serine/threonine-protein kinase 243 367 - -
Phac6g00443 916 SMART tha2 26 241 IPR001938 -
Phac6g00443 916 FunFam THAUMATIN-LIKE PROTEIN 1 24 241 - -
Phac6g00443 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Phac6g00443 916 ProSiteProfiles Bulb-type lectin domain profile. 245 366 IPR001480 -
Phac6g00443 916 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Phac6g00443 916 PRINTS Pathogenesis-related protein signature 124 140 IPR001938 -
Phac6g00443 916 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Phac6g00443 916 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
Phac6g00443 916 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Phac6g00443 916 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Phac6g00443 916 Pfam D-mannose binding lectin 295 379 IPR001480 -
Phac6g00443 916 CDD STKc_IRAK 636 900 - -
Phac6g00443 916 SUPERFAMILY alpha-D-mannose-specific plant lectins 282 424 IPR036426 -
Phac6g00443 916 Gene3D - 249 367 IPR036426 -
Phac6g00443 916 ProSiteProfiles Protein kinase domain profile. 630 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00443 916 SMART blect_4 252 368 IPR001480 -
Phac6g00443 916 Gene3D Thaumatin 24 241 IPR037176 -
Phac6g00443 916 SUPERFAMILY Protein kinase-like (PK-like) 614 898 IPR011009 -
Phac6g00443 916 SUPERFAMILY Osmotin, thaumatin-like protein 24 242 IPR037176 -
Phac6g00443 916 SMART serkin_6 630 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00443 916 Gene3D - 368 518 - -
Phac6g00443 916 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 563 908 - -
Phac6g00443 916 FunFam S-receptor-like serine/threonine-protein kinase 599 704 - -
Phac6g00443 916 Gene3D Phosphorylase Kinase; domain 1 594 704 - -
Phac6g00443 916 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 705 905 - -
Phac6g00443 916 FunFam Serine/threonine-protein kinase 369 510 - -
Phac6g00443 916 Pfam Thaumatin family 30 241 IPR001938 -
Phac6g00443 916 Gene3D Transferase(Phosphotransferase) domain 1 705 905 - -
Phac6g00443 916 CDD TLP-PA 27 240 - -
Phac6g00443 916 Pfam Protein kinase domain 633 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00443 916 ProSiteProfiles Thaumatin family profile. 23 241 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00443 Phac-Chr6 9220822 9231176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00443 616 899 Receptor kinase-like Gene Family AT1G60800 41.781 2.42e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phac6g00443 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00443 - - gsj:114387079 1321.99