Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00433 ATGGTGCCTCGTATTCTCATTACTACACTATCTGAGTCCTTCACACACCACAGAACCACCCAATTCCAATTAAGTTCTCTGCTGCTACACAAACACAATGCTTTTCTTTTTATGTTCAAAACATTCACTTCTGGTAGGAACAGTCTCAAAGGTGTCACCTTTACCGTGTCTTACCTCATCAACTCATTTGGGTTGTCCCTGGAATTGGCCAGGGAACTCTCCAAGAGAGTGAAATTGAAAACCCCAGATGGTCCAAATGCTGTTCTTGACACTCTCAAGAACTATGGATTCTCCAAAGCTCTGGTTGCAAAACTCGTCGAGAAGAATCCCAGGTTGCTTGTTGCAAAGGCAGAGACGACCCTTTTGCCCAAACTCAAGTTCTTTCACTCTATTGGGGTTTCCAACACTGACATGCATAAGATCATGCTTGAAAGCCCCCGTATCTTGGAGAGGAGTCTGGAAAAAATCCTTGTGCCACGATACGAGATTATCAGGCGTATAGTTGGTGATGATCGGAAAGTTGTTAAAGTTTTGACAAGAGCCCCATTTAGCTTCACCGTGTGTGACCTAAGGAAATGCTTGGTTCCAAACATTGAGGTTTTGAGGCAGTCTGGTGTGCCTCAGGGTTCAATTTCTCTGCTGGTGGTTAATTTCCCCCGTGCAACAATGTGGAAGCATTCCAGATTTGTGGAAGTTGTCGAGAGAATTAAGAAATTTGGATTTGACCCTAAGAGAACAAGTTTTGTCATGGCTATCCAAGTGCTTATAACTATGCATAAAGGGGCATGGGAATCGAGATTTGAGATTTATGAGAGGTGGGGCTGGAACTGGGTAATATTTCTTCAAGCGTTTTTGAAGTATCCCAATTTTGTGAAATTGTCCGATGAGACAGTTACGGAGAAAATGAATTTCCTAGTTAATGATATGGGTTTGTCTTCATTAGAAATTGCCGCATTTCCTCCTATTCTAGCCTACAACTTGGAGAAGAGGATTATCCCTAGATTCTCAGTAATTAAAATCTTGAAATCAAAAGATTGTGCAATCTTCATTATCACATTAAAGTGGTGA 1068 0.4167 MVPRILITTLSESFTHHRTTQFQLSSLLLHKHNAFLFMFKTFTSGRNSLKGVTFTVSYLINSFGLSLELARELSKRVKLKTPDGPNAVLDTLKNYGFSKALVAKLVEKNPRLLVAKAETTLLPKLKFFHSIGVSNTDMHKIMLESPRILERSLEKILVPRYEIIRRIVGDDRKVVKVLTRAPFSFTVCDLRKCLVPNIEVLRQSGVPQGSISLLVVNFPRATMWKHSRFVEVVERIKKFGFDPKRTSFVMAIQVLITMHKGAWESRFEIYERWGWNWVIFLQAFLKYPNFVKLSDETVTEKMNFLVNDMGLSSLEIAAFPPILAYNLEKRIIPRFSVIKILKSKDCAIFIITLKW* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00433 355 SMART mt_12 175 207 IPR003690 GO:0003690|GO:0006355
Phac6g00433 355 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
Phac6g00433 355 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Phac6g00433 355 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Phac6g00433 355 SMART mt_12 313 347 IPR003690 GO:0003690|GO:0006355
Phac6g00433 355 PANTHER CGI-12 PROTEIN-RELATED 54 343 IPR003690 GO:0003690|GO:0006355
Phac6g00433 355 Gene3D Transcription termination factor 3, mitochondrial 169 349 IPR038538 -
Phac6g00433 355 Pfam mTERF 89 244 IPR003690 GO:0003690|GO:0006355
Phac6g00433 355 Pfam mTERF 283 346 IPR003690 GO:0003690|GO:0006355
Phac6g00433 355 FunFam Mitochondrial transcription termination factor-like 153 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00433 Phac-Chr6 9086764 9090166 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac6g00433 mTERF 4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00433 K15032 - gmx:100813396 468.774