Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00432 ATGGTGCCTCGTGTTCTCATTACAAGACTATTTGCGTCCTTCACACACTACAGAAGCACCCAATTCCCACTTGGTTCCCTGCTGCAATACAAACACAATGCTTTTCTTTTTATGTTCAACACGTTCACTTCTAGTGGGAACAGCCACAAAGGTGACACCTTTACCGTGTCTTACCTCGTTAACTCATGTGGGTTTTCACTGGAATTGGCCCGGGAACTCGCCAAGAAGGTGAATCTGAAAACCCCAGATGGTCCAAATGCTATTCTTGACACTCTCAAGGACTATGGATTCTCCAAAACTCAGGTTGCAAAACTCGTCCAGAAAAATCCCAGGTTGCTTGCTGCAAAGCTAGAGACGACCCTCTTGCCCAAACTCAAGTTCTTCCACTCTATTGGGGCTTCCAACACTGTCATCCATAAGATCGCGCTTGAAAACCCCTTAATCTTGCTCAGGAGTCTGGAAAACTGCATTGTGCCACGGTACGAGATTATAAGGCGTATAGTTCGTGATGATGGGGAAGTTGTTAGAGTTTTGAGAAATGCCGCACTTGGTTTCACATATTGTGACCTATGGAATGACTTGGTTCCCAACATCGAGATTCTGAGGCAGTCTGGTGTGCCTCAGGGTTCCATCTCTCTGCTGATGGTCAACTTCCCCTCTGCAGCAATGGGGAAGCATTCCAGATTTGTGGAAGTTGTCGAGAGAATTAAGAAAATTGGGTTTGATCACAAGAAAACAAATTTTGTCATGGCTATCCAAGTGCTTTTAACGATGCGCGAAGGAGCATGGGAATCGAAATTTAAGATTTATGAGAGGTGGGGCTGGAACTGGGAAATGGTTCTTCAAGCGTTTGTGAAGTTTCCCAATTTTATGAAGTTATCAGAGGAAACAGTTACGAAAAAAATGACTTTCCTAGTGAAGGATATGGGTTTGCCATCATTAGATATTGCTGCATATCCTCCTCTTCTAGCCTACAACTTGGAGAACAGGATTATCCCTAGACTCACAGTAATTAAAATCTTGAAATCAAAAGGTTTACTTAAGAGTAATTTGAGTTTTGGTTCCTATATGGGCATGACCGAGGAAATATTTTTGAAGAAATTTGTCATTGGTTTCCAGGAAGATTTGCCTTTATTACCAGATGTCTACAAAGGATTGATTCATCATGATGATGTATTGTAG 1182 0.4239 MVPRVLITRLFASFTHYRSTQFPLGSLLQYKHNAFLFMFNTFTSSGNSHKGDTFTVSYLVNSCGFSLELARELAKKVNLKTPDGPNAILDTLKDYGFSKTQVAKLVQKNPRLLAAKLETTLLPKLKFFHSIGASNTVIHKIALENPLILLRSLENCIVPRYEIIRRIVRDDGEVVRVLRNAALGFTYCDLWNDLVPNIEILRQSGVPQGSISLLMVNFPSAAMGKHSRFVEVVERIKKIGFDHKKTNFVMAIQVLLTMREGAWESKFKIYERWGWNWEMVLQAFVKFPNFMKLSEETVTKKMTFLVKDMGLPSLDIAAYPPLLAYNLENRIIPRLTVIKILKSKGLLKSNLSFGSYMGMTEEIFLKKFVIGFQEDLPLLPDVYKGLIHHDDVL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00432 393 PANTHER CGI-12 PROTEIN-RELATED 53 370 IPR003690 GO:0003690|GO:0006355
Phac6g00432 393 FunFam Mitochondrial transcription termination factor-like 153 376 - -
Phac6g00432 393 Gene3D Transcription termination factor 3, mitochondrial 171 375 IPR038538 -
Phac6g00432 393 SMART mt_12 313 347 IPR003690 GO:0003690|GO:0006355
Phac6g00432 393 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Phac6g00432 393 SMART mt_12 246 276 IPR003690 GO:0003690|GO:0006355
Phac6g00432 393 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Phac6g00432 393 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
Phac6g00432 393 Pfam mTERF 259 364 IPR003690 GO:0003690|GO:0006355
Phac6g00432 393 Pfam mTERF 89 301 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00432 Phac-Chr6 9063735 9065454 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac6g00432 mTERF 4.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00432 K15032 - gmx:100813396 520.39