Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00415 ATGGAGCCATCTGCAAAGAAGCCTCGTGGCAGGCCCCCGGGCTCTAAGAACAAGGCAAGCCCCTCCTCTCTCCCAATGCCCAAGCCTGACGAGTCCTCCATGAAGGTATTCAATTTCACTGTACCTCCAAATAGAGACATCATGGAGTTCATATCTGACATTGCTCACAAGGACCACGTTAATGTCTCTATCCTCAGTGCCTCTGGGAAGATTAATAGTGTGATCCTACGTAACTCCACCCATGATGCCACTGGGATCATGATGCATGGCCCTTTCACCTTGCTCTCCCTTTCTGGTTCCTACTTATACAACAACCATAACACCCTTCACTCTGGACCTACCCCTCCATTTCCCCTATCTTTTGGGATAAACATTTGCACCTCTCATGGCCAACTCCTTGGTGGTGTCATTGGCGGTAGCCTCATCTCCGGTGAGGATGTCAGCGTCACGGTCTCCACCTTCAAGAACCCTCAAAGACATCAGAATAATAATAACAACAATGATAACATCACCTCTGGTGATTTCAGTGAGGGTGGCAACTTTGGGGATTGA 552 0.4873 MEPSAKKPRGRPPGSKNKASPSSLPMPKPDESSMKVFNFTVPPNRDIMEFISDIAHKDHVNVSILSASGKINSVILRNSTHDATGIMMHGPFTLLSLSGSYLYNNHNTLHSGPTPPFPLSFGINICTSHGQLLGGVIGGSLISGEDVSVTVSTFKNPQRHQNNNNNNDNITSGDFSEGGNFGD* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00415 183 Pfam Plants and Prokaryotes Conserved (PCC) domain 36 155 IPR005175 -
Phac6g00415 183 CDD DUF296 35 144 IPR005175 -
Phac6g00415 183 MobiDBLite consensus disorder prediction 156 176 - -
Phac6g00415 183 SUPERFAMILY AF0104/ALDC/Ptd012-like 32 165 - -
Phac6g00415 183 ProSiteProfiles PPC domain profile profile. 31 176 IPR005175 -
Phac6g00415 183 MobiDBLite consensus disorder prediction 156 183 - -
Phac6g00415 183 MobiDBLite consensus disorder prediction 1 34 - -
Phac6g00415 183 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 163 IPR014476 GO:0003680
Phac6g00415 183 Gene3D - 33 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00415 Phac-Chr6 8700895 8701479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00415 6 173 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.529 7.47e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00415 - - pvu:PHAVU_006G031200g 218.779