Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00414 ATGACTCCATCTGCAAGAAGGTCAAGTGGCAAAATCCATGGCTCAAAAAGCAAGTCAAGGTCCAACTCTCTTCCAATGACTCAATCCACTGAGTCTTCTGTGAATGTCTTCACTTTTAACGTGGCTCCGAATAGTGATGTCATGGAGTGTATCTTTGACATTGCTAATCGATACCAGGTTAGTGTTACTGTGATTAGTGCCTCTGGCAGAATCAATAACGTGACTCTTCAATCTTCAACCTGCGCTGCACCCAATTTCGTGCTCCATGGACCCTTCACCTTGATCTCCCTCACAGGCTCCTACTTATACAACAATCACTACACCCTTCACCCTGGAGCCACCCCTCCCCTTCCCTTACCCTTTGGGATCAACCTCTCCACCAATGGAGGCAAGGTCTTTTGTGGCATTGTCGGTGGTAGCATCATTGCTCGTGAGAATGTCAAGATCACCTACTTTTATGGATTTCAACCCAACGAGTTTCGGGGTTTGTGGATGATGAATTACGTGAAAATAACAACATAG 522 0.4579 MTPSARRSSGKIHGSKSKSRSNSLPMTQSTESSVNVFTFNVAPNSDVMECIFDIANRYQVSVTVISASGRINNVTLQSSTCAAPNFVLHGPFTLISLTGSYLYNNHYTLHPGATPPLPLPFGINLSTNGGKVFCGIVGGSIIARENVKITYFYGFQPNEFRGLWMMNYVKITT* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00414 173 CDD DUF296 35 143 IPR005175 -
Phac6g00414 173 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 150 IPR014476 GO:0003680
Phac6g00414 173 Pfam Plants and Prokaryotes Conserved (PCC) domain 36 149 IPR005175 -
Phac6g00414 173 Gene3D - 33 153 - -
Phac6g00414 173 SUPERFAMILY AF0104/ALDC/Ptd012-like 32 150 - -
Phac6g00414 173 ProSiteProfiles PPC domain profile profile. 31 158 IPR005175 -
Phac6g00414 173 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00414 Phac-Chr6 8691129 8692178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00414 6 149 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 29.452 4.95e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00414 - - pvu:PHAVU_006G031200g 178.718