Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00400 ATGGAAGAAGCAACTGAGATGCAATCAGAAGAGAATAAATTGTCAATGGAGAAAAATAAGAAAAGAAGACTCAAAACACCTGCCCAGCTCACGGCATTGGAAATTTTTTATAATGATCACAAATATCCCACGGAGGAAATGAAATCAGAACTTGCTGAAGAGTTGGAGTTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAGAAGATTGAAAGATAAAAAGTTGTTGAATGATGAAGTAGGTGCTAATGGACGACAAGATCGTTCAAGTGGTGTTATCCAGGATCGTGGCAGCGGTCTAGTGCAGGATTCGTGTGGAAGCACTAAACATGGTGATTATAGGTATCTGGATCCCAAAGAGGTTGAGAGTCATGGCCTCTATAACCATGAATTTTCAGCTGCAGATATGACCTATGCACACAGGAATCATCATTATACAGAAAATGATAGTGCAACAGATAACACATCATCTGAGAGTTGCTCATCTTTGCAAGACCCATTGCTTCCTCAAGGACAGGATCCATATGATATGGAGCCTTCTAGTCATTTGATGCCTAACAGGTCTCTTCCGCCCCTAAATCCCAAGGGTGCAAATAACATGGGATATAAACCTTCAGGATATTTAAAAGTGAAGGGAGAGATAGAACATGTTGCTATTACTGCAGTCAAAAAGCAGTTAGGAAATCATTTTCAGGAAGATGGACCTTTACTTAGTGTTGAATTTGATACAATTCCTCCAGGGGCATTTGAAGGCCAAATTACAGATCTACCTAATGAAGGATACTATGCTGCAAATTCTGCTCTTCCAAATTCACCAGAAGTCTCTGCTTCGAAAAAGCTATCCAGTAGCTCTAGATATGATTCATATTTTACCAAATTAAGGTTCCAAGATTCACATATGGAAGGAGGTGACTTTGGTTCTTTGCATGGTCCTGATTTCCAGGATAAGAAACCCCACAAGCATATAAATCAAAGACCAACTTTTCACAGTTTTACCAATCATTTTTCTCACAAGAACTCTTCCCTGGATTACTATGTAGACTCTACTGGGGAAGCATCTGCTTATAATGGTGCTAAAAACCATAGGATGGGTACTAAGCATGGTTTTGAGGGGATGAGGTCAGACTCTGCCTCCAACCCTAGTGACCACTATGAAGAGAATACCCTTGCAGTTAAGCAGATAGATTCACTGTTACATCTCTACGATAACATCAATCTGAAGAATGTACAAAAGAATGAATATGTAAAATCTAAGCCTTCAAATTCAATACATAAGTCTCAAATTTACTTGAATGCTGAAGAGAAAGGGCTTACCAAAAGGATGGCCAAGGAAGAGAAGTTTAATGGCGATAGAAAGTTAAAAAAACATTACCATGATCCAGATGGAATTAGGGTGCTTTCAAATGAAAAGATGGTTGCAAAGCGAGCTAAAGTTGACCCATTTGAACAATATGATGTTAAACAAACACCTGTTTCTGACCTGGAACCAAGAAAAAATCAAAGGTCTGCTGCAGAGATGCCATCTAGCTTTAGTGAGGATGAAACTGCTGAAACCAGTTCCTCGGTGGATTAA 1575 0.3924 MEEATEMQSEENKLSMEKNKKRRLKTPAQLTALEIFYNDHKYPTEEMKSELAEELELTEKQISGWFCHRRLKDKKLLNDEVGANGRQDRSSGVIQDRGSGLVQDSCGSTKHGDYRYLDPKEVESHGLYNHEFSAADMTYAHRNHHYTENDSATDNTSSESCSSLQDPLLPQGQDPYDMEPSSHLMPNRSLPPLNPKGANNMGYKPSGYLKVKGEIEHVAITAVKKQLGNHFQEDGPLLSVEFDTIPPGAFEGQITDLPNEGYYAANSALPNSPEVSASKKLSSSSRYDSYFTKLRFQDSHMEGGDFGSLHGPDFQDKKPHKHINQRPTFHSFTNHFSHKNSSLDYYVDSTGEASAYNGAKNHRMGTKHGFEGMRSDSASNPSDHYEENTLAVKQIDSLLHLYDNINLKNVQKNEYVKSKPSNSIHKSQIYLNAEEKGLTKRMAKEEKFNGDRKLKKHYHDPDGIRVLSNEKMVAKRAKVDPFEQYDVKQTPVSDLEPRKNQRSAAEMPSSFSEDETAETSSSVD* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00400 524 MobiDBLite consensus disorder prediction 150 169 - -
Phac6g00400 524 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Phac6g00400 524 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 524 - -
Phac6g00400 524 MobiDBLite consensus disorder prediction 147 189 - -
Phac6g00400 524 Gene3D - 8 91 - -
Phac6g00400 524 MobiDBLite consensus disorder prediction 503 524 - -
Phac6g00400 524 SUPERFAMILY Homeodomain-like 16 79 IPR009057 -
Phac6g00400 524 MobiDBLite consensus disorder prediction 7 23 - -
Phac6g00400 524 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Phac6g00400 524 SMART HOX_1 18 80 IPR001356 GO:0003677
Phac6g00400 524 MobiDBLite consensus disorder prediction 82 110 - -
Phac6g00400 524 MobiDBLite consensus disorder prediction 84 106 - -
Phac6g00400 524 MobiDBLite consensus disorder prediction 1 23 - -
Phac6g00400 524 CDD homeodomain 20 75 IPR001356 GO:0003677
Phac6g00400 524 MobiDBLite consensus disorder prediction 478 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00400 Phac-Chr6 8358670 8364139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00400 3 524 Homeobox Transcription Factor Family AT4G03250 38.007 1.36e-76 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Phac6g00400 Homeodomain 3.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00400 - - gmx:100812697 830.476