Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00399 ATGGAAGAAGCAACTGAGATGCAATCAGAAGAGAATAAATTGTCAATGGAGAAAAATAAGAAAAGAAGACTCAAAACACCTGCCCAGCTCACGGCATTGGAAATTTTTTATAATGATCACAAATATCCCACGGAGGAAATGAAATCAGAACTTGCTGAAGAGTTGGAGTTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAGAAGATTGAAAGATAAAAAGTTGTTGAATGATGAAGTAGGTGCTAATGGACGACAAGATCGTTCAAGTGGTGTTATCCAGGATCGTGGCAGCGGTCTAGTGCAGGATTCGTGTGGAAGCACTAAACATGGTGATTATAGGTATCTGGATCCCAAAGAGGTTGAGAGTCATGGCCTCTATAACCATGAATTTTCAGCTGCAGATATGACCTATGCACACAGGAATCATCATTATACAGAAAATGATAGTGCAACAGATAACACATCATCTGAGAGTTGCTCATCTTTGCAAGACCCATTGCTTCCTCAAGGACAGGATCCATATGATATGGAGCCTTCTAGTCATTTGATGCCTAACAGGTCTCTTCCGCCCCTAAATCCCAAGGGTGCAAATAACATGGGATATAAACCTTCAGGATATTTAAAAGTGAAGGGAGAGATAGAACATGTTGCTATTACTGCAGTCAAAAAGCAGTTAGGAAATCATTTTCAGGAAGATGGACCTTTACTTAGTGTTGAATTTGATACAATTCCTCCAGGGGCATTTGAAGGCCAAATTACAGATCTACCTAATGGATACTATGCTGCAAATTCTGCTCTTCCAAATTCACCAGAAGTCTCTGCTTCGAAAAAGCTATCCAGTAGCTCTAGATATGATTCATATTTTACCAAATTAAGGTTCCAAGATTCACATATGGAAGGAGGTGACTTTGGTTCTTTGCATGGTCCTGATTTCCAGGATAAGAAACCCCACAAGCATATAAATCAAAGACCAACTTTTCACAGTTTTACCAATCATTTTTCTCACAAGAACTCTTCCCTGGATTACTATGTAGACTCTACTGGGGAAGCATCTGCTTATAATGGTGCTAAAAACCATAGGATGGGTACTAAGCATGGTTTTGAGGGGATGAGGTCAGACTCTGCCTCCAACCCTAGTGACCACTATGAAGAGAATACCCTTGCAGTTAAGCAGATAGATTCACTGTTACATCTCTACGATAACATCAATCTGAAGAATGTACAAAAGAATGAATATGTAAAATCTAAGCCTTCAAATTCAATACATAAGTCTCAAATTTACTTGAATGCTGAAGAGAAAGGGCTTACCAAAAGGATGGCCAAGGAAGAGAAGTTTAATGGCGATAGAAAGTTAAAAAAACATTACCATGATCCAGATGGAATTAGGGTGCTTTCAAATGAAAAGATGGTTGCAAAGCGAGCTAAAGTTGACCCATTTGAACAATATGATGTTAAACAAACACCTGTTTCTGACCTGGAACCAAGAAAAAATCAAAGGTCTGCTGCAGAGATGCCATCTAGCTTTAGTGAGGATGAAACTGCTGAAACCAGTTCCTCGGTGGATTAA 1572 0.3925 MEEATEMQSEENKLSMEKNKKRRLKTPAQLTALEIFYNDHKYPTEEMKSELAEELELTEKQISGWFCHRRLKDKKLLNDEVGANGRQDRSSGVIQDRGSGLVQDSCGSTKHGDYRYLDPKEVESHGLYNHEFSAADMTYAHRNHHYTENDSATDNTSSESCSSLQDPLLPQGQDPYDMEPSSHLMPNRSLPPLNPKGANNMGYKPSGYLKVKGEIEHVAITAVKKQLGNHFQEDGPLLSVEFDTIPPGAFEGQITDLPNGYYAANSALPNSPEVSASKKLSSSSRYDSYFTKLRFQDSHMEGGDFGSLHGPDFQDKKPHKHINQRPTFHSFTNHFSHKNSSLDYYVDSTGEASAYNGAKNHRMGTKHGFEGMRSDSASNPSDHYEENTLAVKQIDSLLHLYDNINLKNVQKNEYVKSKPSNSIHKSQIYLNAEEKGLTKRMAKEEKFNGDRKLKKHYHDPDGIRVLSNEKMVAKRAKVDPFEQYDVKQTPVSDLEPRKNQRSAAEMPSSFSEDETAETSSSVD* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00399 523 MobiDBLite consensus disorder prediction 150 169 - -
Phac6g00399 523 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Phac6g00399 523 MobiDBLite consensus disorder prediction 147 189 - -
Phac6g00399 523 Gene3D - 8 91 - -
Phac6g00399 523 SUPERFAMILY Homeodomain-like 16 79 IPR009057 -
Phac6g00399 523 MobiDBLite consensus disorder prediction 7 23 - -
Phac6g00399 523 SMART HOX_1 18 80 IPR001356 GO:0003677
Phac6g00399 523 MobiDBLite consensus disorder prediction 82 110 - -
Phac6g00399 523 MobiDBLite consensus disorder prediction 477 523 - -
Phac6g00399 523 MobiDBLite consensus disorder prediction 502 523 - -
Phac6g00399 523 MobiDBLite consensus disorder prediction 84 106 - -
Phac6g00399 523 MobiDBLite consensus disorder prediction 1 23 - -
Phac6g00399 523 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 523 - -
Phac6g00399 523 CDD homeodomain 20 75 IPR001356 GO:0003677
Phac6g00399 523 Pfam Homeodomain 20 75 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00399 Phac-Chr6 8358670 8364139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00399 3 523 Homeobox Transcription Factor Family AT4G03250 37.823 4.63e-74 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Phac6g00399 Homeodomain 3.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00399 - - gmx:100812697 823.928