Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00395 ATGGTGCCACTGGGTTGGATCTCTGAGGATGCCAGGAATTTGGCTCATGAACATGCACAAGTGGTGCCAATTTCACTTTTTGTGGCTGTTCTCTGCCTTTGTTTGGTCATTGGTTACTTGCTTGAAGAAAATCGATGGGTTAATGAATCCATAGTTGCCATTATAGTAGGAATCTTTGCTGGAATTATGCTGTTATTGATCACCAAAGGAAAGAGTTCTCTCATCCTTACATTTAGTGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTGAAGAAGAAACAATTCTTCCATAACTTTTTAACCATCATGATGTTTGGTGTCATCGGTGTTTTCATTTCAACTCTTGTAATTACTTGTGGCAGCTGGTGGATATTCCCCAAGTTGAACTTACTTGGTCTGACTGGACAAGATTTTCTTGCTATAGGAACAATTTTCTCATCAACGGACACAGTTTGTACCCTGCAGGTTCTCCATCAAGATGAGACTCCTTTACTATACAGCCTAGTCTTTGGAGAAGGAGTGGTAAATGATGCCACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGCTTGATGTTTCAAAATTTAGCAACAAGACATTCCGAGTTATTGGAGATTTCTTGTATTTATTCTTGTTAAGCACTGGTCTTGGAGTTCTAGCTGGCCTCCTCACATCATATATCTTGAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCATTGATGATGTTAATGGCATACCTATCCTACATGTTAGCAGAGCTATGTGATCTAAGTGGAATCCTCACCGTTTTCTTTTGTGGAATACTCATGTCACACTATGCATGGTATAATGTGACTGAAACTTCAAGAATCACAACCAGGCATGTGTTTGCAACAATGTCATTTATTGCAGAAACCTTCATATTTCTATATGTGGGCATGGATGCCCTTGACATTGAGAAGTGGAAGATGACTCAATTAAGTTATGGAAATTTGCTGGGGATATACAGTTCCTTAATACTATTGATATTGCTTGGGCGGGCTGCATTTGTTTTCCCTCTCTCTACTGTTGCCAATTATACGAACACACGTGCTAGTTCTGACCGAGCATCACGCATCACTTTCGGACATCAGATAATCATTTGGTGGGCCGGGCTAATGAGGGGAGCTGTCTCCATTGCTCTGGCTTTCAAACAGTTCACATTTTCTGGAGTTACTTCTGATCCAGTTAAAGCAACAATGATTACCAACACCATTATTGTTGTCCTTTTTAGCACACTGGTTTTTGGTTTTCTCACAAAACCATTAATCAGATATCTCCTACCCACACTGCTACAAGGAAAAACATCAACCATGAAGAATCAGGCCCACAAATTGAGGACTTGA 1404 0.3989 MVPLGWISEDARNLAHEHAQVVPISLFVAVLCLCLVIGYLLEENRWVNESIVAIIVGIFAGIMLLLITKGKSSLILTFSEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMMFGVIGVFISTLVITCGSWWIFPKLNLLGLTGQDFLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSKFSNKTFRVIGDFLYLFLLSTGLGVLAGLLTSYILKALSFGRHSSVREIALMMLMAYLSYMLAELCDLSGILTVFFCGILMSHYAWYNVTETSRITTRHVFATMSFIAETFIFLYVGMDALDIEKWKMTQLSYGNLLGIYSSLILLILLGRAAFVFPLSTVANYTNTRASSDRASRITFGHQIIIWWAGLMRGAVSIALAFKQFTFSGVTSDPVKATMITNTIIVVLFSTLVFGFLTKPLIRYLLPTLLQGKTSTMKNQAHKLRT* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00395 467 Gene3D - 143 195 - -
Phac6g00395 467 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Phac6g00395 467 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Phac6g00395 467 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Phac6g00395 467 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Phac6g00395 467 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Phac6g00395 467 PANTHER SODIUM/HYDROGEN EXCHANGER 17 446 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00395 Phac-Chr6 8291533 8297839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00395 12 464 Antiporters AT5G55470 71.145 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00395 - - gmx:100813332 770.385