Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00382 ATGACGAGTGTGATACTCAGAAGATCGTCCTCCGTAATCTCGCGCCGCTTCTTCGCCACTCTCGCCTCCATCGAACCGGTTCCGCGCCACCGCGGACTTGCCGTGCTCCGGCACGGTGGCTCCAGCGACGGAGTTGGAGTCAGATCCTTGCATGCGAAATCCGGACCGTTGAACTTCCGCTCGTCGCCGGTTTCTCGCGGGGCGCAGCTCGCCGTGGAGCGCGACTACTCCAATGAAGAGGTCGGTTCCGGCACGAACTGCGACGAAGGACTCGAGATCGCGAAGCTCGGCATCTCGAGGGAGATCGTGGATGCTTTGGCCAAGAAAGGGATCGCAAAGCTGTTTCCTATTCAGAAAGCTGTGCTGGAACCTGCAATGCAGGGACGTGATATGATTGGTCGAGCTAGGACAGGAACTGGGAAAACTCTTGCATTTGGGATACCCATCTTAGACCGGATTATTCAGCTTAATGCTAAGCATGGGCGTGGAAAAGATCCTTTGGCTATGGTTTTGGCTCCAACTAGAGAACTTGCACGGCAGGTTGAGAAGGAATTCAATGAGGCCGCACCTAACCTGGACACGATCTGTCTTTATGGGGGTATGCCCATCCAGCAACAAATGAGGCAGCTTAATTATGGTGTAGATATTGCTGTAGGCACACCTGGTCGAATTATTGATCTTCTCAATAGGAGGGCACTGAATTTGAAGGATGTAAAGTTTGTTGTTCTTGATGAAGCTGATCAGATGCTTCAAGTAGGATTTCAAGAAGCTGTGGAGAGGATCTTGGAGAATTTATCTCCAAATCGTCAGACTCTTATGTTCTCAGCAACAATGCCACCTTGGATAAAGACTATTACCCGCAATTACCTAAACAACCCCCTTACCATTGATCTCGTTGGAGATTCTGATCAGAAGTTGGCAGATGGAATTTCACTGTACTCTATTGTGTCTGATATGCGCACTAAAGCAGGGATTCTTGTACCCCTGATAACAGAACATGCTAATGGAGGAAAGTGTATTGTTTTCACTCAAACCAAACGTGATGCTGATCGATTATCACATGTGATGGCAAAAAGCCTTAAATGTGAGGCTTTGCATGGAGATATTTCACAAACTCAGAGGGAAAGGACTCTTGCTGGTTTCAGAAACAACCATTTCAATGTTTTAGTGGCAACTGATGTTGCATCACGTGGCCTTGATGTTCCAAATGTGGATCTCGTAATACATTATGAACTCCCCAGTTCATCAGAGATATTTGTTCACCGATCTGGACGAACAGGCCGTGCTGGCAAGAAAGGAGCTGCTATTCTTATTTACTCAGAAGATCAATTCAGGACTGTGAAGACTATTGAGCGTGATGTTGGATGCAAATTTACAGAGCTAGCAAAGATTAATGTTCAGAGTGGATCAGTAGATATGTTTGGTGGATGGAGTGGTGGTCGATTTGGTTCTTCAGGAGGTATGAGGGATCGTCAATCTGGAGGTACAGGTTTTGGTCGCAGTCCTGGATTTGGCCGTTCTGGCAGTTACACTAATTCTGGATTTGGCGGATCTAGCTATGGAAATTCCAGTTCTGGCAGTTACACTAACTCCGGGTTTGGCCGATCTAGCCATGGGAATTCCAGTGAGACGGGAAGCTTTGGAGGACCAAGTTCTAGCCGTTTTGGCAGCCCTGGTTCTAATCGGTCAGGAGGGGGTTTCGGTGGATTTGGTAGTTCAGATCGATTTGGTGGTTTTGGTGATAGAAAGTGA 1752 0.4766 MTSVILRRSSSVISRRFFATLASIEPVPRHRGLAVLRHGGSSDGVGVRSLHAKSGPLNFRSSPVSRGAQLAVERDYSNEEVGSGTNCDEGLEIAKLGISREIVDALAKKGIAKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDRIIQLNAKHGRGKDPLAMVLAPTRELARQVEKEFNEAAPNLDTICLYGGMPIQQQMRQLNYGVDIAVGTPGRIIDLLNRRALNLKDVKFVVLDEADQMLQVGFQEAVERILENLSPNRQTLMFSATMPPWIKTITRNYLNNPLTIDLVGDSDQKLADGISLYSIVSDMRTKAGILVPLITEHANGGKCIVFTQTKRDADRLSHVMAKSLKCEALHGDISQTQRERTLAGFRNNHFNVLVATDVASRGLDVPNVDLVIHYELPSSSEIFVHRSGRTGRAGKKGAAILIYSEDQFRTVKTIERDVGCKFTELAKINVQSGSVDMFGGWSGGRFGSSGGMRDRQSGGTGFGRSPGFGRSGSYTNSGFGGSSYGNSSSGSYTNSGFGRSSHGNSSETGSFGGPSSSRFGSPGSNRSGGGFGGFGSSDRFGGFGDRK* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00382 583 MobiDBLite consensus disorder prediction 526 583 - -
Phac6g00382 583 Gene3D - 303 472 IPR027417 -
Phac6g00382 583 CDD SF2_C_DEAD 310 439 - -
Phac6g00382 583 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 92 464 - -
Phac6g00382 583 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 325 470 IPR001650 -
Phac6g00382 583 SMART helicmild6 350 430 IPR001650 -
Phac6g00382 583 Pfam Helicase conserved C-terminal domain 324 430 IPR001650 -
Phac6g00382 583 Pfam DEAD/DEAH box helicase 115 284 IPR011545 GO:0003676|GO:0005524
Phac6g00382 583 MobiDBLite consensus disorder prediction 482 510 - -
Phac6g00382 583 Gene3D - 92 300 IPR027417 -
Phac6g00382 583 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 122 296 IPR014001 -
Phac6g00382 583 SMART ultradead3 110 313 IPR014001 -
Phac6g00382 583 FunFam ATP-dependent RNA helicase RhlE 80 299 - -
Phac6g00382 583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 451 IPR027417 -
Phac6g00382 583 CDD DEADc 102 297 - -
Phac6g00382 583 MobiDBLite consensus disorder prediction 526 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00382 Phac-Chr6 8128614 8135318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00382 96 461 Eukaryotic Initiation Factors Gene Family AT3G19760 32.162 4.93e-63 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00382 - - gmx:100802553 808.905