Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00345 ATGAAGAATTCTAAGAAAACGGGTGTACGGAAATACCAAAAATCGGAAAATCCACGCTTGCGATGGACACCTGAACTCCATGAATACTTTGTTGAAGTTGTGGAAGGTCTTGGTGGAAAAAACAAGGCAACTCCAAAGAGCATTCTGCAGATGATGCATGTGAAAGGACTAAGAATCTCTCACATTAAAAGCCATCTTCAGATGTACAGGAATCTGAAGGGACATATGATTCTCTCATCAATGCATGAGAAGATGGAAGGGAATGAAGAAGTTAAAGATCTCCCAATGTACTCCAATTGTTCATCCCAAAGATCACAAGAAGAAAAATTTAGGACATCAAAATATGATATGGGGATTGTGACTCAAGAAACTCACACCTTAGAAAATAAAGGGCTTTCACAGAGCAGTGAAACAGATTACGATCTAAATCAGGAACCCGAATCATGTTACATACATAGTGATACGTCAAATGAAGAAAATAGTAGGACAATGAAATTTCTTGATCTCTCATTCTCTTTTAGCTCTCAACTATTTCCAACGATGCATGGTAATCAAGAGAGGGTGCATTTTTCTTCACCAAATACAGCAGATAATCATGCCCTCGATTCTAATTCTGTACAATCTCATGGGACCAATTACATAAATTTAGACCTAGCAATATGA 663 0.3756 MKNSKKTGVRKYQKSENPRLRWTPELHEYFVEVVEGLGGKNKATPKSILQMMHVKGLRISHIKSHLQMYRNLKGHMILSSMHEKMEGNEEVKDLPMYSNCSSQRSQEEKFRTSKYDMGIVTQETHTLENKGLSQSSETDYDLNQEPESCYIHSDTSNEENSRTMKFLDLSFSFSSQLFPTMHGNQERVHFSSPNTADNHALDSNSVQSHGTNYINLDLAI* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00345 220 SUPERFAMILY Homeodomain-like 16 71 IPR009057 -
Phac6g00345 220 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 134 IPR046955 GO:0003700
Phac6g00345 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 74 IPR017930 -
Phac6g00345 220 FunFam Two-component response regulator 13 77 - -
Phac6g00345 220 NCBIfam myb-like DNA-binding domain, SHAQKYF class 17 71 IPR006447 GO:0003677
Phac6g00345 220 Gene3D - 17 73 - -
Phac6g00345 220 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00345 Phac-Chr6 7530230 7536139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00345 8 70 G2-like Transcription Factor Family AT1G14600 68.254 1.30e-24 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac6g00345 Myb_DNA-binding 2.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00345 - - vun:114187568 390.193