Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00339 ATGCACCATTTTCTGCTTGCTAGATTAACAACTAGGACCCCCCACTTTGGTGTTCTTTGTCACAATGCCATTCTTTTCTTCAATTCACGTACTTTATCTGTATCAAACACAAAGCATCACAAAGGTGGCACCTTTAATTCATTTAGCATCATCAATTCATGTGGGTTGTCCCCTAAAACGGCCCTAGAATTCTCCAAAAGGTTGGAATTGAAAAACCCAGATGGGGCAAATGCGGTAATTGATCTTCTCAGGAACTATGGGTTCTCGGAGACCCAGTTATGTAGCCTTGTAAAGAAACTCCCTTCCGTGCTTTTGTCAAATCCAGACAAGACCCTTTTGCCAAAACTCAAGTTCTTTCGTTCTATTGGGTTTTCACCCACTGACCTTCCTGCATTCCTCGTTAGGAAACCTACATTTCTGAAATCAAGCTTGGAGAAAACCATTCGCCCTTGTTATGTGGTAATCAGAAGTCTAGTTCGCTGTGATAAGGAAGTAGTTTCCACTCTAAAGCATGCCCTGTGGCACTTTAACAGCAGAAATGTGGTGAATAATTCACTTCCAAACATAGAGGCTTTGAGACAGCTTGGCCTGCCTCAAGGTTCCATTTCTCTCCTGGTAGCCAATTTTCCTAGTGTCACATTTATGAAGCATGCAGGATTTGTTGAGGCTGTGGAGAAAGTGAAGGAAATGGGGTTTGATCCTTTGAAAACAAGTTTTGTTATGGCCCTTAAAGCTTTTGCAGATATAAGTGAAGCATCATGGAAATCTAAGTTAGAAGTTTTGGAGAAATGTGGCTGGTCCAGTGATATCTCTCTTTTAGCTTTCAAAAAGCATCCCCAGTTTATGGTCTCATCAGAAAGCAAGATTCTTAAAATAATGAGCTTTTTGACGAAGGATGTGGGTTTGGCCCCTGAAGAGATTGCTAGATGCCCTGCTCTTCTTAAATGTAACTTGGAGAAGACAGTTATCCCCAGATTTGCAGTTATTAAAATTTTGAAGAGAAAGGGTTTGATTAAGAGTGATTTGAAAATAAGTACCTTTATTAAGATCAGTGAGAAATTGTTTTTGGAGAAATATGTGACTCGATTTCAGAGTTATGAGCCACTAGTATTGGCTGCATACAAAGGTCAGAAGTCAAATTGA 1143 0.4007 MHHFLLARLTTRTPHFGVLCHNAILFFNSRTLSVSNTKHHKGGTFNSFSIINSCGLSPKTALEFSKRLELKNPDGANAVIDLLRNYGFSETQLCSLVKKLPSVLLSNPDKTLLPKLKFFRSIGFSPTDLPAFLVRKPTFLKSSLEKTIRPCYVVIRSLVRCDKEVVSTLKHALWHFNSRNVVNNSLPNIEALRQLGLPQGSISLLVANFPSVTFMKHAGFVEAVEKVKEMGFDPLKTSFVMALKAFADISEASWKSKLEVLEKCGWSSDISLLAFKKHPQFMVSSESKILKIMSFLTKDVGLAPEEIARCPALLKCNLEKTVIPRFAVIKILKRKGLIKSDLKISTFIKISEKLFLEKYVTRFQSYEPLVLAAYKGQKSN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00339 380 Gene3D Transcription termination factor 3, mitochondrial 57 179 IPR038538 -
Phac6g00339 380 Gene3D Transcription termination factor 3, mitochondrial 180 368 IPR038538 -
Phac6g00339 380 PANTHER CGI-12 PROTEIN-RELATED 47 362 IPR003690 GO:0003690|GO:0006355
Phac6g00339 380 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Phac6g00339 380 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Phac6g00339 380 SMART mt_12 203 233 IPR003690 GO:0003690|GO:0006355
Phac6g00339 380 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
Phac6g00339 380 SMART mt_12 237 267 IPR003690 GO:0003690|GO:0006355
Phac6g00339 380 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Phac6g00339 380 Pfam mTERF 293 355 IPR003690 GO:0003690|GO:0006355
Phac6g00339 380 Pfam mTERF 80 308 IPR003690 GO:0003690|GO:0006355
Phac6g00339 380 FunFam Mitochondrial transcription termination factor-like 144 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00339 Phac-Chr6 7487914 7490566 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac6g00339 mTERF 6.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00339 K15032 - gmx:106799612 535.413