Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00332 ATGGTGCCCAATTTTTTCATTTCAAGATTAATTGCATCTTCATTATTCACAGGCTACAGGAGTACCCATCTTCTATTGGGTTCTCTACTGCCATACAAACACACTGCTTCACTTTTTTTCTTCAATTCTTTCACTTCACGCACTTCCTCTGATTCCGAATCAGATGAAAACCATCACAAAGGTGACACCTTTACTGTATCTTACCTCATCAACTCATGTGGGGTGTCCCTAACTCTGGCTAGGGAACTCTCCAACAGGGTCAATTTGAAAACCCCAGATGGCCCAGATGCTGTCATTGATATCCTCAGCAACTATGGGTTCTCAAAATCCCAGCTTGCAAAGCTTGTGGCGAGACATCCTTCCGTGCTATTTGCAAAAGTAGAGGATACCCTTTTGCCTAAACTCAAGTTCTTTCGTTCTATTGGGTTTTCCAACACTGACATACCGAAGATCCTGATTGCGAACCATGGTATCTTGAAGAGGAGCTTGGAAAAATGCATCATCCCTCGCTATGAGATCCTAAAGATAGTAGTTCGTAATGATCGGGAAGTTGTTAGAGCTATTAAAAATGCCCCATTAGGTTTCGTGTATGGTGACTTAATGAATAAGTTGGTTCCAAACATTAACATTTTGAGGCAATGTGGTGTGCCTCAGGCTTCCATCTCTCACCTGGTGACCAATTCTCTGTCTGCAGCATATGTGGAGCATTCCAGGTTTGTGGAAGCTATCAAGACAGTTAAGGAAATTGGATTTAGTCCTTTGAAAATGGACTTTGTTGTTGCTATTCACGTGCTTGTAACTATGAGAAAAGAAGTGTGGGATTCAAGATTTGAGGTTTATGAAAGATGGGGCTGGAACCGGGAAATGGCTCTTCGAGCATTTAGGAAGTTTCCCAGTTTTATGAAGTTTTCAGGGGAAACATTTTCCAGAAAGATGAGTTTCCTAGTGAAGGATATGGGTTGCCCATCAGAAGCTATTGCTGAATACCCTCTAGTTGTAGCGTACAGCTTGGAGAAGAGGATTGTTCCTAGGTTCTCTGTAATTAAAATCTTGAAATCAAAAGGTCTTCTTGAGAAAAACGTGCCCTTTAGTTCCATTATTTGCACAACTGAGGAAAAATTCTTGGAGAAATTTGTCGTCAGTTTTCAGAATGTTGTGCCCCTCTTACCAGACCTCTACAGAGGTTTCATCAATCAGTCAAATGTAATGTAG 1212 0.4125 MVPNFFISRLIASSLFTGYRSTHLLLGSLLPYKHTASLFFFNSFTSRTSSDSESDENHHKGDTFTVSYLINSCGVSLTLARELSNRVNLKTPDGPDAVIDILSNYGFSKSQLAKLVARHPSVLFAKVEDTLLPKLKFFRSIGFSNTDIPKILIANHGILKRSLEKCIIPRYEILKIVVRNDREVVRAIKNAPLGFVYGDLMNKLVPNINILRQCGVPQASISHLVTNSLSAAYVEHSRFVEAIKTVKEIGFSPLKMDFVVAIHVLVTMRKEVWDSRFEVYERWGWNREMALRAFRKFPSFMKFSGETFSRKMSFLVKDMGCPSEAIAEYPLVVAYSLEKRIVPRFSVIKILKSKGLLEKNVPFSSIICTTEEKFLEKFVVSFQNVVPLLPDLYRGFINQSNVM* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00332 403 SMART mt_12 149 180 IPR003690 GO:0003690|GO:0006355
Phac6g00332 403 SMART mt_12 256 286 IPR003690 GO:0003690|GO:0006355
Phac6g00332 403 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Phac6g00332 403 SMART mt_12 323 357 IPR003690 GO:0003690|GO:0006355
Phac6g00332 403 SMART mt_12 113 144 IPR003690 GO:0003690|GO:0006355
Phac6g00332 403 SMART mt_12 185 217 IPR003690 GO:0003690|GO:0006355
Phac6g00332 403 FunFam Mitochondrial transcription termination factor-like 163 386 - -
Phac6g00332 403 PANTHER CGI-12 PROTEIN-RELATED 63 380 IPR003690 GO:0003690|GO:0006355
Phac6g00332 403 Gene3D Transcription termination factor 3, mitochondrial 180 384 IPR038538 -
Phac6g00332 403 Pfam mTERF 269 375 IPR003690 GO:0003690|GO:0006355
Phac6g00332 403 Pfam mTERF 99 304 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00332 Phac-Chr6 7381257 7383644 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac6g00332 mTERF 4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00332 K15032 - gmx:100786641 617.461