Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00326 ATGGTTCCTAATTTTCTGATTCGAACGTTAAGTGCATCATTCACAAACCACAAAAGTACCCAAATTCTATTGGGTTCTCTGCTGCAACAGAAACCCAATGCTTTCCTTTTATACTTCAAATACTTCACTTCAAGCACCACTTTCGATTCTGAATCAGATGGAAATCACCACAAAGATGACACCTTTACCGTTTCTTATCTCATTAACTCATGTGGGGTGTCCCCAAAATTGGCCCGGGAACTCTCCAACAAGGTTAATTTGAAGAACCCAGATGGCCCTAATGCTGTTATTGATCTTCTCAGCAGCTATGGGTTCTCCAAATCCCAGCTTGCAAAACTTGTGCAGAATCATCCGAAATTGATTTGTGCAAATGCCGAGAATACCCTTTTGCCGAAACTCAAGTTCTTCCGTTCTATTGGGGTTTCCGACACTGACTTACCAAAGATAGTAATTAGTGGCCGTCATATGTTGTCCAGAAGCCTGGAAAAATGCCTCATTCCGCGTTATGAAATCCTAAGGAGTGTACTTCTTGACGGTGAGAAAGTTGTTAGGTCTTTGAAAAGTGCCCCATTTGGTTTTTTGTTTGGTGACATGAAAAAACACTTGCTTCCAAACATTGAGTTTTTGAGGCAATGTGGTGTGCCCCAAGCTTCCATCTCTTACCTGATGATACATGCTGGGACTCTAGCCTACCGAGAACATTCCAAATTTGTGGAAGTTGTCAACACTGCTAAGGAAATTGGGTTTAATCCTTTGAGAATAAATTTTATTGTGGCTATTGAAGTGCTTAGTAAGAGGAAGACATGGTGGGAATCAAGGTTTGAGACTTATGAGAGGTGGGGATGGGACCGGGAAATGGCTCTTCGAGTAATTCGGAAGTTTCCCGCTGTAGTAAAGTTGTCAGAGGAGACGTTTACCCAAAAAATGAGTTTCCTTGTGAAGGAGATGGGTTGTACATCAGAAGCTATTGCTGAATATCCTGTGGTTGTAGGCTACAACTTGGAGAAGAGGATTATCCCTAGATTTTCGGTTATCAAAATCTTGAAATCAAAGGGTCTGCTTGAGAACAGTTTGTCCTTTAGTTCCTTTATTTGCATAAAGGAAAATACTTTTTTGGAGAAATTTGTTGTCAATTTTCAGAAAGATTTGCCTATAGTGCGAGATGTCTACAGCAGTTTGATCAATAAACAGAGTGTAATATAA 1203 0.404 MVPNFLIRTLSASFTNHKSTQILLGSLLQQKPNAFLLYFKYFTSSTTFDSESDGNHHKDDTFTVSYLINSCGVSPKLARELSNKVNLKNPDGPNAVIDLLSSYGFSKSQLAKLVQNHPKLICANAENTLLPKLKFFRSIGVSDTDLPKIVISGRHMLSRSLEKCLIPRYEILRSVLLDGEKVVRSLKSAPFGFLFGDMKKHLLPNIEFLRQCGVPQASISYLMIHAGTLAYREHSKFVEVVNTAKEIGFNPLRINFIVAIEVLSKRKTWWESRFETYERWGWDREMALRVIRKFPAVVKLSEETFTQKMSFLVKEMGCTSEAIAEYPVVVGYNLEKRIIPRFSVIKILKSKGLLENSLSFSSFICIKENTFLEKFVVNFQKDLPIVRDVYSSLINKQSVI* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00326 400 PANTHER CGI-12 PROTEIN-RELATED 62 377 IPR003690 GO:0003690|GO:0006355
Phac6g00326 400 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
Phac6g00326 400 SMART mt_12 183 215 IPR003690 GO:0003690|GO:0006355
Phac6g00326 400 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
Phac6g00326 400 SMART mt_12 288 319 IPR003690 GO:0003690|GO:0006355
Phac6g00326 400 SMART mt_12 320 354 IPR003690 GO:0003690|GO:0006355
Phac6g00326 400 Pfam mTERF 267 371 IPR003690 GO:0003690|GO:0006355
Phac6g00326 400 Pfam mTERF 97 254 IPR003690 GO:0003690|GO:0006355
Phac6g00326 400 Gene3D Transcription termination factor 3, mitochondrial 156 383 IPR038538 -
Phac6g00326 400 FunFam Mitochondrial transcription termination factor-like 161 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00326 Phac-Chr6 7324590 7327901 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac6g00326 mTERF 1.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00326 K15032 - gmx:100777030 543.888