Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00313 ATGCATGAAGAGGTGAATTCATTTGGGGACAAAGAATGGTATTTTTTCTGCATAAGAGGGAGGAAGTACAGGAACAGTGTGAGGCCAAACAGGGTAACTAGGTCAGGGTTCTGGAAAGCCACAGGAATAGACAAGTCCATATACTGCCTGAAGGAACCTCATGAATGCATTGGCCTGAAGAAGTCATTGGTGTACTATCGTGGAAGTGCTGGCAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCACCAAATGCAAAATCTACCACCAACATTGCTAATGCTACCAATAACCTTCATGAAGCTGAGGTGTGGACACTCTGCAGAATATTCAAACGCACCCCAACTTTCAAAAAGTACACTCCAAATTTGAAGGACTCAACAGCCATCACCAAATCCAACACTGTGAATTCCAACACAAGCACCTTAGATTCTGACAACTGCAAGCCATATTTGATCTGCAGAGACCCTGAGATGATGCAACAACTAAAGCCAGTATTTGGACAGGTTGATGAAAAGAAACACTTATTTCTTGGTCAGTTTGGCCAACTACCCCATCTTCAAACCCCATCAACCCCTTATCCAAGTTTTTGGAACCAGAATGTTGAAGAGTATGCATTTGCCAATGAGAATTGGGATGACCTCAGATCTGTGGTTCAGTTTGCCATTGATCCTTCCTCTGTGTTTGATTGTACAGAAGAAACACATATTCCACCCTACTTTTCTTAG 738 0.4268 MHEEVNSFGDKEWYFFCIRGRKYRNSVRPNRVTRSGFWKATGIDKSIYCLKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNAKSTTNIANATNNLHEAEVWTLCRIFKRTPTFKKYTPNLKDSTAITKSNTVNSNTSTLDSDNCKPYLICRDPEMMQQLKPVFGQVDEKKHLFLGQFGQLPHLQTPSTPYPSFWNQNVEEYAFANENWDDLRSVVQFAIDPSSVFDCTEETHIPPYFS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00313 245 Gene3D NAC domain 2 120 IPR036093 GO:0003677|GO:0006355
Phac6g00313 245 Pfam No apical meristem (NAM) protein 7 85 IPR003441 GO:0003677|GO:0006355
Phac6g00313 245 SUPERFAMILY NAC domain 7 115 IPR036093 GO:0003677|GO:0006355
Phac6g00313 245 ProSiteProfiles NAC domain profile. 1 116 IPR003441 GO:0003677|GO:0006355
Phac6g00313 245 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00313 Phac-Chr6 6893773 6899042 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00313 18 228 NAC Transcription Factor Family AT2G43000 47.005 1.18e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac6g00313 NAM 4.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00313 - - gmx:100819795 413.69