Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00312 ATGAATGCTAAGGTACAAGACTGTGATGATACCAAGAAGACTGAAGAAGTTGTGCTTCCTGGCTTCAGATTCCACCCCACAGATGAAGAACTTGTTGGGTTCTATCTGCAGAGAAAGGTGGAAAAGAAGCCTCTTAAAATTGAACTCATCAAACAGGTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGGTGAATTCATTTGGGGACAAAGAATGGTATTTTTTCTGCATAAGAGGGAGGAAGTACAGGAACAGTGTGAGGCCAAACAGGGTAACTAGGTCAGGGTTCTGGAAAGCCACAGGAATAGACAAGTCCATATACTGCCTGAAGGAACCTCATGAATGCATTGGCCTGAAGAAGTCATTGGTGTACTATCGTGGAAGTGCTGGCAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCACCAAATGCAAAATCTACCACCAACATTGCTAATGCTACCAATAACCTTCATGAAGCTGAGGTGTGGACACTCTGCAGAATATTCAAACGCACCCCAACTTTCAAAAAGTACACTCCAAATTTGAAGGACTCAACAGCCATCACCAAATCCAACACTGTGAATTCCAACACAAGCACCTTAGATTCTGACAACTGCAAGCCATATTTGATCTGCAGAGACCCTGAGATGATGCAACAACTAAAGCCAGTATTTGGACAGGTTGATGAAAAGAAACACTTATTTCTTGGTCAGTTTGGCCAACTACCCCATCTTCAAACCCCATCAACCCCTTATCCAAGTTTTTGGAACCAGAATGTTGAAGAGTATGCATTTGCCAATGAGAATTGGGATGACCTCAGATCTGTGGTTCAGTTTGCCATTGATCCTTCCTCTGTGTTTGATTGTACAGAAGAAACACATATTCCACCCTACTTTTCTTAG 921 0.4224 MNAKVQDCDDTKKTEEVVLPGFRFHPTDEELVGFYLQRKVEKKPLKIELIKQVDIYKYDPWDLPKVNSFGDKEWYFFCIRGRKYRNSVRPNRVTRSGFWKATGIDKSIYCLKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNAKSTTNIANATNNLHEAEVWTLCRIFKRTPTFKKYTPNLKDSTAITKSNTVNSNTSTLDSDNCKPYLICRDPEMMQQLKPVFGQVDEKKHLFLGQFGQLPHLQTPSTPYPSFWNQNVEEYAFANENWDDLRSVVQFAIDPSSVFDCTEETHIPPYFS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00312 306 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Phac6g00312 306 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 210 - -
Phac6g00312 306 Gene3D NAC domain 27 181 IPR036093 GO:0003677|GO:0006355
Phac6g00312 306 ProSiteProfiles NAC domain profile. 18 177 IPR003441 GO:0003677|GO:0006355
Phac6g00312 306 FunFam NAC domain-containing protein 35 27 180 - -
Phac6g00312 306 SUPERFAMILY NAC domain 16 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00312 Phac-Chr6 6893773 6899042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00312 6 178 NAC Transcription Factor Family AT5G39820 59.140 3.01e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac6g00312 NAM 1.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00312 - - gmx:100819795 535.413