Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00307 ATGGAAGAAAAGCCGAATTTGCCAGTCAGGTATTTCTTGAGAAAGCTAAAGAAGGTCAAGAAAAGCAATGGGCAAATGCTAGCCATCAATGAGATTTTTGAGAAAAATCCTACCAAGATCAAGAACTACGGGATTTGGCTGCGGTATCAGAGCCGGACTGGTTATCACAACATGTTCAAGGAATACCGAGATACTACTCTAAACGGTGCTGTTGAACAAATGTACAACGAAATGGCATCTCGTCATAGAGTCAGGTGTCCATGCATACAGATTATTAAGACTGCTACCATCCCAATTAAACTTTGCAAAAGGGAGTGCACCAAGCAGTTCCACGACTCGAAAATCAAGTTCCCTTTGGTGTTCAAGAAGATTAGGCCCCCTACTAGGAAGCTCAAAACAACATACAAGGCATCCAAGCCCAACCTGTTCATGTAA 435 0.4253 MEEKPNLPVRYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMFKEYRDTTLNGAVEQMYNEMASRHRVRCPCIQIIKTATIPIKLCKRECTKQFHDSKIKFPLVFKKIRPPTRKLKTTYKASKPNLFM* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00307 144 Gene3D - 38 113 - -
Phac6g00307 144 FunFam 60S ribosomal protein L18a 38 113 - -
Phac6g00307 144 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 11 94 IPR023573 GO:0003735|GO:0005840|GO:0006412
Phac6g00307 144 PIRSF Ribosomal_L18a 7 144 IPR021138 GO:0003735|GO:0005840|GO:0006412
Phac6g00307 144 Gene3D - 7 37 - -
Phac6g00307 144 SUPERFAMILY RplX-like 37 112 - -
Phac6g00307 144 PANTHER 60S RIBOSOMAL PROTEIN L18A 11 143 IPR028877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00307 Phac-Chr6 6740008 6742575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00307 11 144 Cytoplasmic Ribosomal Protein Gene Family AT3G14600 90.299 2.46e-89 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00307 K02882 K22683 csv:101207017 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g00307 6 6740008 6742575 Phac6g00307 6 6740008 6742575 ECH