Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00299 ATGATTCCCCGATACGAACCTATCAACACAATGGGATCTCAAGGTAATGGGCAACAGTCTCATTTACAGCCTTCATCTTTGTCTAGGCAAGGTTCATGGTATAATCTTACTCTTGATGAGGTTAATAGTCAATTAGGAGACTTAGGGAAGCCATTGGGGAGCATGAACCTTGATGAGCTTCTTCAAAATGTGTGGACTGCTGAAGCAAGTAAGTCTTCGGTGATAGGCGTGGATAGTGAGAACATGTCGTCCTCTTCCTCGCTTCAGCGGCAGGCCAGCCTGACGTTGGCTCGTGCGTTGAGTGGGAAGACTGTGGATGAGGTGTGGAGGGAAATTCAGCAAGGTCAGAAGAAAAGGTATGGAGATGAAGTGAAGACTGAGGAGGGAGAAATGACTTTTGGTGAGACCACTTTGGAAGATTTCTTGGTGCAAGCAGGGCTTTTTGCTGAAGCTTCAATCAGTCCAGCCGTCGGATTGGATACAATGGATTTCTCCACTGCTCAAGGTTTCCAGCACAAAACGGGCTTGTCATCCTCCCCTTCTATTGGCAGTTTATCAGACACGAGGCCGGGCCGGAAAAGGGATGCTCCTGATGCATTTGAGAAAACCCTGGAGAGGAGGTTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCTCGGTCACGAGCTCGGAAACAGGCATACCATAATGAACTGGTTGGCAAGGTTTCTCGTCTAGAAGAAGAAAATGTAAAGCTAAAGAAAGAGAAGGAATTCGAAGAAAGGTTAACTCCCGATCCATTGCCTGAACCAAAATATCAACTTCGAAGACATAACTCTGCCCCTTTCTGA 831 0.4669 MIPRYEPINTMGSQGNGQQSHLQPSSLSRQGSWYNLTLDEVNSQLGDLGKPLGSMNLDELLQNVWTAEASKSSVIGVDSENMSSSSSLQRQASLTLARALSGKTVDEVWREIQQGQKKRYGDEVKTEEGEMTFGETTLEDFLVQAGLFAEASISPAVGLDTMDFSTAQGFQHKTGLSSSPSIGSLSDTRPGRKRDAPDAFEKTLERRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENVKLKKEKEFEERLTPDPLPEPKYQLRRHNSAPF* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00299 276 Coils Coil 229 256 - -
Phac6g00299 276 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 209 224 IPR004827 GO:0003700|GO:0006355
Phac6g00299 276 MobiDBLite consensus disorder prediction 171 198 - -
Phac6g00299 276 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 204 256 - -
Phac6g00299 276 MobiDBLite consensus disorder prediction 247 276 - -
Phac6g00299 276 MobiDBLite consensus disorder prediction 1 27 - -
Phac6g00299 276 MobiDBLite consensus disorder prediction 219 234 - -
Phac6g00299 276 MobiDBLite consensus disorder prediction 171 186 - -
Phac6g00299 276 MobiDBLite consensus disorder prediction 9 27 - -
Phac6g00299 276 SMART brlzneu 202 274 IPR004827 GO:0003700|GO:0006355
Phac6g00299 276 SUPERFAMILY Leucine zipper domain 206 253 IPR046347 GO:0003700|GO:0006355
Phac6g00299 276 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 204 249 IPR004827 GO:0003700|GO:0006355
Phac6g00299 276 CDD bZIP_plant_BZIP46 206 243 - -
Phac6g00299 276 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 27 275 IPR043452 GO:0003700|GO:0045893
Phac6g00299 276 Gene3D - 204 256 - -
Phac6g00299 276 Pfam bZIP transcription factor 206 250 IPR004827 GO:0003700|GO:0006355
Phac6g00299 276 MobiDBLite consensus disorder prediction 247 266 - -
Phac6g00299 276 MobiDBLite consensus disorder prediction 212 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00299 Phac-Chr6 6585454 6594655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00299 26 276 bZIP Transcription Factor Family AT3G56850 46.503 3.66e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac6g00299 bZIP_1 3.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00299 K14432 - gmx:100798549 449.899