Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00293 ATGAATTCATTTGAGCCAGATGGAAATGGGAAGGAGGAGTCACTTCCACCACCACCACCTGTTGTTCCCTCTGATGTTGTACCTCTGACTGCTGAAGAAGTACTCTCTCATGTTGAACCTGTTAAAAAAAAGGTGTCTCGACTTCCAGTTGCCAGACGTGGTCTGGGATCGAGAGGAATGAAAATACAATTACTAACCAATCACTTTAAAGTTAATGTCGCTAAAAACGATGGACATTTCTTCCATTATAGCGTGGCTTTTACTTACGAAGATGGACGTCCTGTGGAAGGTAAGGGTGTAGGGAGAAAGATAATGGACAGGGTGCAAGAAACATACCATTCTGAATTAAATGGTAAGGACTTTGCATATGATGGGGAGAAAAGTTTGTTTACTATGGGCTCTCTCCCTCGGAACAAGCTTGAATTTGAAGTTGTTCTGGAGGATGTCACCTCTAACAGGAACAATGGCAATTGCAGCCCTGATGGTAATGGGGATAATGAGAGTGACAGAAAGAGGATGCGACGTCCTTACCATGCAAAGTCATTCAAAGTAGAGATAAGCTACGCAGCAAAAATTCCAATGCAGGCCATCACCAATGCCTTACGTGGGCAAGAGACAGAGAATTTTCAAGAAGGCATTAGAGTTCTTGACATAATTTTGAGGCAGCATGCTGCTAAGCAAGGCTGCTTGCTTGTACGCCAATCTTTTTTCCACAATGATCCAAAAAATTTTGCTGATGTAGGAGGTGGTGTTCTTGGCTGTAGAGGATTCCATTCAAGTTTTAGAACCACACAGAGTGGCCTGTCTCTCAACATAGATGTTTCAACTACCATGATAATTACTCCTGGGCCTGTGGTGGATTTCTTAATTTCCAATCAAAATGTTAGAGATCCTTTTCAACTTGACTGGGCTAAGGCCAAAAGGACCTTAAAGAATCTGAGGATTAAAACCAAGCCATCCAATCAAGAATTCAAAATTAATGGGCTCAGTGAATATTCATGCAAAAAGCAGACTTTTACTTTGAAGGGTAAAGGTGGAGGGGATGGTGATGGTACTGAGGAAATCACTGTTTATGATTATTTTGTTAATGTTAGAAAGATAGACTTGCGATACTCAGCTGAACTTCCATGCATTAATGTTGGCAAGCCTAAACGACCAACTTATTTTCCCATTGAGCTTTGTGAATTGGTATCATTGCAACGATATACAAAAGCTTTGTCCAACCTTCAAAGGGCTTCATTAGTGGAAAAGTCCAGGCAGAAGCCACAAGAGAGGATGAAAATTTTGTCTGATGCACTTAGACGCAGCAACTATGGGTCTGAACCTTTGCTCCGTAATTGTGGAATTTCTATAAGCACTGGTTTCACTGAAGTGGAGGGTCGGGTTTTGCCTGCACCAAAGTTGAAGTTTGGCAATGGCGAGGACATCAATCCAAGGAATGGGAGATGGAATGTTAGCAACAAGAGATTTGTGGAGCCGTCAAAAATAGAAAGATGGGCTGTTGCTAACTTCTCGGCACGCTGTGATGTACGAGGACTTGTGCGTGATCTGATTAGAATTGGAGATATGAAAGGAATTTTGATAGAGCAGCCGTTTGAGGTGTTTGATGAGAATCCTCAGTATAGGCGTGCCCCACCCATGGTTAGAGTGGAGAAGATGTTTGAAACAATCCAGTCTAAACTTCCTGGCGCTCCGCAGTTCCTACTCTGTTTACTTCCTGATCGGAAAAATTGTGATATTTATGGTCCATGGAAAAAGAAGAATCTTGCTGATTTTGGAATCATTAATCAGTGTATGTGTCCTTTAAGGGTCAATGATCAGTACCTTACCAATGTTATGTTGAAGATCAATGCCAAGCTTGGTGGATTGAATTCAATGTTAGGTGTTGAACATACTCCTTCTCTTCCCATTGTTTCCAAAGCTCCCACTCTCATTCTGGGCATGGATGTGTCACATGGCTCTCCTGGGCAGACTGATATTCCTTCAATTGCTGCGGTGGTCAGTTCTAGACAGTGGCCTCTGATATCTAAGTATAGGGCTTGTGTTCGTACCCAATCTGCAAAGGTTGAAATGATAGATAATTTGTTCAAGCAAGTGTCTGAAAAGGAAGATGAAGGCATTATGAGGGAACTTCTGCTTGATTTCTATTCAACTTCAGGAAGGAGAAAACCTGAAAATATTATCATATTCAGGGATGGAGTTAGTGAGTCACAGTTCAATCAAGTTTTGAATATTGAACTTGATCGTATCATTGAGGCTTGCAAATTTCTTGATGAAAATTGGGAGCCAAAGTTTTTGGTAATTGTTGCTCAGAAGAATCACCACACCAGATTTTTCCAGCCTGACTCTCCTGACAATGTCCCTCCTGGAACTGTTATCGACAATAGAATTTGTCATCCCAGAAATTATGATTTCTACCTTTGTGCACATGCTGGAATGATAGGAACTAGCAGGCCTACCCATTACCATGTGCTGCTAGATGAGATTGGTTTCTCTCCGGATCAGCTGCAGGAGCTTGTCCATTCATTATCATACGTGTATCAGAGAAGCACTACTGCCATTTCTGTTGTTGCGCCAATTTGCTATGCACACTTGGCTGCATCCCAGCTGGGGCATTTCATGAAGTTGGAGGACAAATCTGAAACAACATCAAGCCATGGTGGAGTGAGTGGTGCTGGTGCTGTTCCCGTCCCTCAGATGCCTCCTTTGAAGGAAAATGTGCGCAACACAATGTTCTTTTGTTGA 2745 0.4222 MNSFEPDGNGKEESLPPPPPVVPSDVVPLTAEEVLSHVEPVKKKVSRLPVARRGLGSRGMKIQLLTNHFKVNVAKNDGHFFHYSVAFTYEDGRPVEGKGVGRKIMDRVQETYHSELNGKDFAYDGEKSLFTMGSLPRNKLEFEVVLEDVTSNRNNGNCSPDGNGDNESDRKRMRRPYHAKSFKVEISYAAKIPMQAITNALRGQETENFQEGIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIITPGPVVDFLISNQNVRDPFQLDWAKAKRTLKNLRIKTKPSNQEFKINGLSEYSCKKQTFTLKGKGGGDGDGTEEITVYDYFVNVRKIDLRYSAELPCINVGKPKRPTYFPIELCELVSLQRYTKALSNLQRASLVEKSRQKPQERMKILSDALRRSNYGSEPLLRNCGISISTGFTEVEGRVLPAPKLKFGNGEDINPRNGRWNVSNKRFVEPSKIERWAVANFSARCDVRGLVRDLIRIGDMKGILIEQPFEVFDENPQYRRAPPMVRVEKMFETIQSKLPGAPQFLLCLLPDRKNCDIYGPWKKKNLADFGIINQCMCPLRVNDQYLTNVMLKINAKLGGLNSMLGVEHTPSLPIVSKAPTLILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSAKVEMIDNLFKQVSEKEDEGIMRELLLDFYSTSGRRKPENIIIFRDGVSESQFNQVLNIELDRIIEACKFLDENWEPKFLVIVAQKNHHTRFFQPDSPDNVPPGTVIDNRICHPRNYDFYLCAHAGMIGTSRPTHYHVLLDEIGFSPDQLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQLGHFMKLEDKSETTSSHGGVSGAGAVPVPQMPPLKENVRNTMFFC* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00293 914 Gene3D paz domain 276 402 - -
Phac6g00293 914 FunFam Protein argonaute 3 635 914 - -
Phac6g00293 914 Pfam N-terminal domain of argonaute 61 220 IPR032474 -
Phac6g00293 914 Pfam Mid domain of argonaute 477 530 IPR032473 -
Phac6g00293 914 SUPERFAMILY Ribonuclease H-like 551 873 IPR012337 -
Phac6g00293 914 Pfam Argonaute linker 2 domain 424 470 IPR032472 -
Phac6g00293 914 SUPERFAMILY PAZ domain 277 438 IPR036085 GO:0005515
Phac6g00293 914 CDD Piwi_ago-like 442 867 IPR045246 -
Phac6g00293 914 Gene3D - 634 914 IPR036397 GO:0003676
Phac6g00293 914 MobiDBLite consensus disorder prediction 1 24 - -
Phac6g00293 914 ProSiteProfiles PAZ domain profile. 307 398 IPR003100 GO:0005515
Phac6g00293 914 Gene3D - 462 628 - -
Phac6g00293 914 SMART Piwi_a_2 567 875 IPR003165 GO:0003676
Phac6g00293 914 Pfam PAZ domain 286 414 IPR003100 GO:0005515
Phac6g00293 914 CDD PAZ_argonaute_like 282 397 - -
Phac6g00293 914 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 44 876 - -
Phac6g00293 914 MobiDBLite consensus disorder prediction 153 173 - -
Phac6g00293 914 SMART DUF1785_2 230 282 IPR014811 -
Phac6g00293 914 FunFam Protein argonaute 7 277 402 - -
Phac6g00293 914 ProSiteProfiles Piwi domain profile. 567 875 IPR003165 GO:0003676
Phac6g00293 914 Pfam Piwi domain 568 875 IPR003165 GO:0003676
Phac6g00293 914 Pfam Argonaute linker 1 domain 232 280 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00293 Phac-Chr6 6416398 6425448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00293 52 914 Eukaryotic Initiation Factors Gene Family AT5G43810 35.523 2.46e-165 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00293 K11593 - gmx:100820376 1681