Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00283 ATGAATGGGCAGAAAATTAAGCGTCGAGTGGGTAAATATGAGGTAGGGAGGACCATTGGGGAGGGAACATTTGCAAAGGTGAAATTTGCTAGAAACTCTGAGACTGGGGAGCCAGTGGCTCTTAAGATTCTTGACAAGGAGAAGGTTCTCAAGTATATGCTGGTTGAGCAGATCCAGAGAGAAATAGCCACAATGAAGTTGATCAAGCATCCAAATGTTGTTCAACTACATGAGGTCATGGGGAGCAAGACAAAAATATACATTATTTTAGAGTTTGTGACTGGGGGAGAGCTTTTTCATAAAATTTTAAACACTGGACGGATGAGAGAAAAGGAAGCACGAAGACATTTCCAGCAGCTTATAAATGCTGTTGACTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTGAAACTAGAGAACTTACTATTAGATGCTTCTGGGAACCTTAAAATTTCTGATTTTGGATTGAGTGCACTTTCCCAACAAGTCAGGGATGATGGACTGCTCCATACAACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTTAATGATGGAGGCTATGATGGGGCAGCTGCAGATTTGTGGTCATGTGGTGTGATTCTCTTTGTATTGCTTGCAGGTTACTTGCCTTTTGATGACACTAATCTTTTGAACCTGTATAAAAAAATTTCAGCTGCTGAATTCACTTGCCCCCCTTGGCTTTCTTTTAGTGCCAGAAAATTGATAACTAGAATCTTGAATCCCAACCCCGTGACTCGTATCACTGTACAGGAGATTTTGTGTGATGAATGGTTTAAAAAAGACTATAAACTTCCGGTTTTCGAGGAGACAAAGGAGAGCAACACTGATGACATTGAGACCATCTTTAAAGACTATGAAGTGCACAATGTAAGAGAGAAGGAAGATCAGCCAACAGCTATGAATGCATTTGAATTGATATCCTTGTCCAAAGGGCTGAACCTAGAAAACTTGTTTGACATAGACCAGGTTTTTAACTTCATGTGA 1014 0.4093 MNGQKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKYMLVEQIQREIATMKLIKHPNVVQLHEVMGSKTKIYIILEFVTGGELFHKILNTGRMREKEARRHFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKISDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDGGYDGAAADLWSCGVILFVLLAGYLPFDDTNLLNLYKKISAAEFTCPPWLSFSARKLITRILNPNPVTRITVQEILCDEWFKKDYKLPVFEETKESNTDDIETIFKDYEVHNVREKEDQPTAMNAFELISLSKGLNLENLFDIDQVFNFM* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00283 337 FunFam Non-specific serine/threonine protein kinase 6 308 - -
Phac6g00283 337 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 328 - -
Phac6g00283 337 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00283 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Phac6g00283 337 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00283 337 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Phac6g00283 337 CDD STKc_SnRK3 12 267 - -
Phac6g00283 337 SUPERFAMILY Protein kinase-like (PK-like) 9 280 IPR011009 -
Phac6g00283 337 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Phac6g00283 337 Pfam NAF domain 307 332 IPR004041 GO:0007165
Phac6g00283 337 Gene3D Transferase(Phosphotransferase) domain 1 3 325 - -
Phac6g00283 337 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00283 337 FunFam Non-specific serine/threonine protein kinase 4 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00283 Phac-Chr6 6331757 6338651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00283 4 334 CBL-interacting serine-threonine protein kinases AT2G26980 80.723 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac6g00283 Pkinase 8.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00283 - - cpap:110810700 575.089