Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00282 ATGAGAACTCTTATGTGCGAGACAAAATACCAAATTAATTATCAAACAAATCCTTATGCACTAAATTCATTTCTTAAAGTGCATCATGCAAGATTTCATATTTCATTTTTGCAGGTCATGGGGAGCAAGACAAAAATATACATTATTTTAGAGTTTGTGACTGGGGGAGAGCTTTTTCATAAAATTTTAAACACTGGACGGATGAGAGAAAAGGAAGCACGAAGACATTTCCAGCAGCTTATAAATGCTGTTGACTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTGAAACTAGAGAACTTACTATTAGATGCTTCTGGGAACCTTAAAATTTCTGATTTTGGATTGAGTGCACTTTCCCAACAAGTCAGGGATGATGGACTGCTCCATACAACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTTAATGATGGAGGCTATGATGGGGCAGCTGCAGATTTGTGGTCATGTGGTGTGATTCTCTTTGTATTGCTTGCAGGTTACTTGCCTTTTGATGACACTAATCTTTTGAACCTGTATAAAAAAATTTCAGCTGCTGAATTCACTTGCCCCCCTTGGCTTTCTTTTAGTGCCAGAAAATTGATAACTAGAATCTTGAATCCCAACCCCGTGACTCGTATCACTGTACAGGAGATTTTGTGTGATGAATGGTTTAAAAAAGACTATAAACTTCCGGTTTTCGAGGAGACAAAGGAGAGCAACACTGATGACATTGAGACCATCTTTAAAGACTATGAAGTGCACAATGTAAGAGAGAAGGAAGATCAGCCAACAGCTATGAATGCATTTGAATTGATATCCTTGTCCAAAGGGCTGAACCTAGAAAACTTGTTTGACATAGACCAGGGATTTAAAAGAGAAATAAGGTTCACATCAAAATGCCCTGCCAATGAGATTATCAACAAGATTGAAGAAGCTGCAAAACCTCTTGGTTTTGATGTGCAGAAGAAAAATTTCAAGATGAAGCTTAAAAATGTGAAAGCTGGAAGGAAGGGAAACCTCAATGTTGCAACAGAGATATTTCAAGTGGCACCTTCTCTTCACGTGGTTAAGATTAATAAAGCAAAAGGTGATACATTAGAGTTCCTCAAGTTCTACAACAAGCTTTCAACATGCTTGGAGGATGTTGTTTGGAAAACTGAAGATGACATGGAAAATGCAAAGGGAAATTGA 1203 0.3832 MRTLMCETKYQINYQTNPYALNSFLKVHHARFHISFLQVMGSKTKIYIILEFVTGGELFHKILNTGRMREKEARRHFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKISDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDGGYDGAAADLWSCGVILFVLLAGYLPFDDTNLLNLYKKISAAEFTCPPWLSFSARKLITRILNPNPVTRITVQEILCDEWFKKDYKLPVFEETKESNTDDIETIFKDYEVHNVREKEDQPTAMNAFELISLSKGLNLENLFDIDQGFKREIRFTSKCPANEIINKIEEAAKPLGFDVQKKNFKMKLKNVKAGRKGNLNVATEIFQVAPSLHVVKINKAKGDTLEFLKFYNKLSTCLEDVVWKTEDDMENAKGN* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00282 400 Gene3D Kinase associated domain 1, KA1 264 389 - -
Phac6g00282 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Phac6g00282 400 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00282 400 Gene3D Phosphorylase Kinase; domain 1 25 56 - -
Phac6g00282 400 FunFam Non-specific serine/threonine protein kinase 53 235 - -
Phac6g00282 400 Gene3D Transferase(Phosphotransferase) domain 1 57 230 - -
Phac6g00282 400 FunFam Non-specific serine/threonine protein kinase 264 389 - -
Phac6g00282 400 Pfam Protein kinase domain 32 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00282 400 SMART serkin_6 19 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00282 400 CDD CIPK_C 271 380 - -
Phac6g00282 400 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 26 374 - -
Phac6g00282 400 Pfam NAF domain 267 326 IPR004041 GO:0007165
Phac6g00282 400 SUPERFAMILY Protein kinase-like (PK-like) 31 241 IPR011009 -
Phac6g00282 400 ProSiteProfiles NAF domain profile. 265 289 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00282 Phac-Chr6 6331757 6338651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00282 34 350 CBL-interacting serine-threonine protein kinases AT2G26980 77.358 0.0 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac6g00282 Pkinase 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00282 - - qsu:112026068 620.157