Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00281 ATGAATGGGCAGAAAATTAAGCGTCGAGTGGGTAAATATGAGGTAGGGAGGACCATTGGGGAGGGAACATTTGCAAAGGTGAAATTTGCTAGAAACTCTGAGACTGGGGAGCCAGTGGCTCTTAAGATTCTTGACAAGGAGAAGGTTCTCAAGTATATGCTGGTTGAGCAGATCCAGAGAGAAATAGCCACAATGAAGTTGATCAAGCATCCAAATGTTGTTCAACTACATGAGTTAAACACTGGACGGATGAGAGAAAAGGAAGCACGAAGACATTTCCAGCAGCTTATAAATGCTGTTGACTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTGAAACTAGAGAACTTACTATTAGATGCTTCTGGGAACCTTAAAATTTCTGATTTTGGATTGAGTGCACTTTCCCAACAAGTCAGGGATGATGGACTGCTCCATACAACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTTAATGATGGAGGCTATGATGGGGCAGCTGCAGATTTGTGGTCATGTGGTGTGATTCTCTTTGTATTGCTTGCAGGTTACTTGCCTTTTGATGACACTAATCTTTTGAACCTGTATAAAAAAATTTCAGCTGCTGAATTCACTTGCCCCCCTTGGCTTTCTTTTAGTGCCAGAAAATTGATAACTAGAATCTTGAATCCCAACCCCGTGACTCGTATCACTGTACAGGAGATTTTGTGTGATGAATGGTTTAAAAAAGACTATAAACTTCCGGTTTTCGAGGAGACAAAGGAGAGCAACACTGATGACATTGAGACCATCTTTAAAGACTATGAAGTGCACAATGTAAGAGAGAAGGAAGATCAGCCAACAGCTATGAATGCATTTGAATTGATATCCTTGTCCAAAGGGCTGAACCTAGAAAACTTGTTTGACATAGACCAGGAGTCTGGTTGA 936 0.4177 MNGQKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKYMLVEQIQREIATMKLIKHPNVVQLHELNTGRMREKEARRHFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKISDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDGGYDGAAADLWSCGVILFVLLAGYLPFDDTNLLNLYKKISAAEFTCPPWLSFSARKLITRILNPNPVTRITVQEILCDEWFKKDYKLPVFEETKESNTDDIETIFKDYEVHNVREKEDQPTAMNAFELISLSKGLNLENLFDIDQESG* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00281 311 Pfam Protein kinase domain 82 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00281 311 Pfam Protein kinase domain 13 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00281 311 ProSiteProfiles Protein kinase domain profile. 13 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00281 311 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Phac6g00281 311 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 304 - -
Phac6g00281 311 Pfam NAF domain 283 305 IPR004041 GO:0007165
Phac6g00281 311 FunFam Non-specific serine/threonine protein kinase 4 86 - -
Phac6g00281 311 Gene3D Kinase associated domain 1, KA1 280 311 - -
Phac6g00281 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 108 120 IPR008271 GO:0004672|GO:0006468
Phac6g00281 311 FunFam Non-specific serine/threonine protein kinase 74 251 - -
Phac6g00281 311 ProSiteProfiles NAF domain profile. 281 305 IPR018451 GO:0007165
Phac6g00281 311 Gene3D Transferase(Phosphotransferase) domain 1 82 252 - -
Phac6g00281 311 SUPERFAMILY Protein kinase-like (PK-like) 9 256 IPR011009 -
Phac6g00281 311 Gene3D Phosphorylase Kinase; domain 1 3 81 - -
Phac6g00281 311 SMART serkin_6 13 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00281 Phac-Chr6 6331757 6338651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00281 4 309 CBL-interacting serine-threonine protein kinases AT2G26980 74.924 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac6g00281 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00281 - - cpap:110810700 520.776