Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00276 ATGGGAAATACTTGTGCGAAAGGAAAACCGATTGCTCATGTATCTTCCTCCAATTTGTCTGGAAGTAAGAGGCCTGTAAGTAAGCCAAGGCAGTATTCAAATTCTTCTGTACAAAATCAAGCTCCAAAAGCTTCAGAATCAAATATTACCGCATCCATCTCTAGTAGCCTCAAGTCCTTTAGCTTGAATGATCTAAAGGAGGCCACTAAGAACTTCAGGCGAGAAAATTTAATCGGAGAGGGAGGATTTGGGCGTGTCTTCAAAGGATGGATTGATGAGAACACATATGGTCCCACAAGACCAGGCACTGGAATTGTGGTGGCCATTAAAAATCTTAAGCCAGAAAGCTTCCAAGGCCACAAGGAATGGCTTGCAGAAGTCAGTTATCTTGGGCAGCTTCAGCATGAGAATTTGGTGAAACTTATTGGTTATTGTTTGGAAGGTAAAAACAGGCTTCTGGTCTATGAGTTCATGCAAAAAGGAAGTTTGGAGAATCATTTATTCAGAAAAGGTGTTCAACCTATGGCTTGGGTTACAAGGGTCAACATTGCAATTAGTGTAGCAAGAGGACTGACATTCTTACATTCCCTGGACCAAAATGTGATCTTTCGTGATTTAAAGGCTTCCAATATCCTACTTGATTCAGACTTCAATGCAAAGCTTTCAGATTTTGGCTTGGCAAGGGATGGTCCAACTGGAGATAATACTCATGTTTCAACTCGAGTTATAGGAACTCAAGGTTATGCTGCACCAGAGTATGTTGCTACAGGTCACCTGACTTCAAGGAGTGATGTATATAGCTTTGGTGTAGTCTTGTTAGAGTTGCTTACCGGTAGGCGTGCAGTGGAAGATGACAGACCTGGATTTTCAGAGGAAACCTTGGTGGATTGGGCAAAGCCATTCTTGATTGACAACAGAAGAGTTTTGAGAATAATGGACACAAGGTTGGGGGGTCAATACTCTAAGAAAGGAGCACAAGCTGCAGCTGCACTTGCACTGCAATGCCTCAACACTGACCCCAAATTTAGACCCCCTATGGTGGAAGTTCTAGCAGCATTGGAAGGGCTTAATTCCTCAAACTCATTCACAAGGACACCACCACCACCTGAGAGCCATGCAACCAAAAATTCTGATGGCCATTCACAAAAGTAA 1152 0.4288 MGNTCAKGKPIAHVSSSNLSGSKRPVSKPRQYSNSSVQNQAPKASESNITASISSSLKSFSLNDLKEATKNFRRENLIGEGGFGRVFKGWIDENTYGPTRPGTGIVVAIKNLKPESFQGHKEWLAEVSYLGQLQHENLVKLIGYCLEGKNRLLVYEFMQKGSLENHLFRKGVQPMAWVTRVNIAISVARGLTFLHSLDQNVIFRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTSRSDVYSFGVVLLELLTGRRAVEDDRPGFSEETLVDWAKPFLIDNRRVLRIMDTRLGGQYSKKGAQAAAALALQCLNTDPKFRPPMVEVLAALEGLNSSNSFTRTPPPPESHATKNSDGHSQK* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00276 383 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 158 366 - -
Phac6g00276 383 MobiDBLite consensus disorder prediction 1 48 - -
Phac6g00276 383 Pfam Protein tyrosine and serine/threonine kinase 75 352 IPR001245 GO:0004672|GO:0006468
Phac6g00276 383 FunFam Serine/threonine-protein kinase BIK1 38 157 - -
Phac6g00276 383 ProSiteProfiles Protein kinase domain profile. 72 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00276 383 MobiDBLite consensus disorder prediction 10 48 - -
Phac6g00276 383 Gene3D Phosphorylase Kinase; domain 1 46 157 - -
Phac6g00276 383 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
Phac6g00276 383 PANTHER OS01G0588500 PROTEIN-RELATED 39 356 - -
Phac6g00276 383 CDD STKc_IRAK 78 356 - -
Phac6g00276 383 Gene3D Transferase(Phosphotransferase) domain 1 158 367 - -
Phac6g00276 383 MobiDBLite consensus disorder prediction 358 383 - -
Phac6g00276 383 SMART serkin_6 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00276 383 MobiDBLite consensus disorder prediction 358 375 - -
Phac6g00276 383 SUPERFAMILY Protein kinase-like (PK-like) 47 364 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00276 Phac-Chr6 6303258 6306910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00276 29 353 Glycoside Hydrolase AT3G07070 48.780 8.35e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac6g00276 PK_Tyr_Ser-Thr 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00276 - - vum:124843429 676.396