Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00263 ATGGATCGCAAAGATAATCGTAAACAACCACTTTCTGATCATGGGTTCGAATCTTGCGCCAAAGAGAAGATGAAGAGATCCGTTTTGGGTTCTTTCAAAGCTGAACTTGAATCAGTGGCGGATGAGGAAAACCCTTCCCCAAAACTCAGTACGTGTGATATCTGCTTCAGGAGTTTCAGCTGCGGCAAGGCCTTAGGTGGACACAGAAGATCCCACTTTATGAAGCAGCAGCAGCAGCAAAAGAAGGTAAAGACCCGTTTAACTGATAATCACTCGTCAAAACCTGGTGATAGTAACATTAGGGTTATCTGTGATTTTGATGATGATGACGGCAAACACATTTGCTGTATTTGCAAGAAGGAATTTCCTACCAAGAATGCTTTGTTTGGGCACATGAGATCTCATCCTGAGAGACCATGGAGGGGTGTGTCCCCTCCTACTCAAAAGAACTCATCTTCTCCTTCTTCTTCCTACTACTATTCTTCTTCTTCTTCTTCCCTCAATTCTGATTCCATGGAGAAAAACAAGGAGGATCATGATGTTGACGATGGCTGTGATGGGGCTGACGGGGTGATCGCATCTCATGAACATCACACGAATCTCGTTGATCTTTTAATGTTTACTTCACCCAGCTGGCTCAGGAAAGATACAAGAGGCAGAAATTCTATTGGTGGGTACCAGGCTGCTGAAACTCTTTTTTTCATGAGTTCTTATTCCAAGTACTTTTGCAGTGAGCCTAATAGGGTTTTCCCCGACAAGGAACAAGTGCAGCCGAAGAGTGCCCCAGCCCTAATCAAGCAGCGCAAAAGAAAGATTTGTCAATCCTCGTCAAGTAAGAAAGATACGGTGAAGAAGATAAAATTTTTATTTAAAGGTGAATTGAACTTGGGAAACACATCCAATGGGGTTGGTGAATGTGATGGTGAGGCTAATGAACTTAACAGGTTGAAGGGTTTATGTGAATCTGGGGTTGAGTATAACCATGATGATGAGAAGAAGGGTATGGGTGAGAGTTTTGATGATTTGAATGCTGAAATGGTTACTCCAACTAATAAGGTGCAAGAGCATGTTGGTCCTTCTGAGGTGAAGAAGAATATGGATAAGAAAGGGAAACACAGTAAGAAGACGGTACTGAATTCAAGGACAAAGGACTCGGAATCTGAGAAAGCGAGTCAAGAGAAAGCAGATTGGTATAAATGTTCTGCATGTGGAAAAAGCTTCAAGACTTTCCAAGGCCTAGGAGGCCACAGGTCAGTCCACAAAGAGAAGAACACTGTAAGCATTGATGAGCCAAACCCCTTGGAAGCTGTTGCTGAACCAAACAACTCTAGCAGCTCCTGCAACTTGAGCAAGATGGAGGACCCATTATTTAATGAACCAACCATACCAGATCAGCCATGCCAATCTTCAGGTGTCAAGCAACTCAATTTTGATCTCAATGAGCTACCTTGTGCTATGGACGAGGAGGACTAG 1473 0.4331 MDRKDNRKQPLSDHGFESCAKEKMKRSVLGSFKAELESVADEENPSPKLSTCDICFRSFSCGKALGGHRRSHFMKQQQQQKKVKTRLTDNHSSKPGDSNIRVICDFDDDDGKHICCICKKEFPTKNALFGHMRSHPERPWRGVSPPTQKNSSSPSSSYYYSSSSSSLNSDSMEKNKEDHDVDDGCDGADGVIASHEHHTNLVDLLMFTSPSWLRKDTRGRNSIGGYQAAETLFFMSSYSKYFCSEPNRVFPDKEQVQPKSAPALIKQRKRKICQSSSSKKDTVKKIKFLFKGELNLGNTSNGVGECDGEANELNRLKGLCESGVEYNHDDEKKGMGESFDDLNAEMVTPTNKVQEHVGPSEVKKNMDKKGKHSKKTVLNSRTKDSESEKASQEKADWYKCSACGKSFKTFQGLGGHRSVHKEKNTVSIDEPNPLEAVAEPNNSSSSCNLSKMEDPLFNEPTIPDQPCQSSGVKQLNFDLNELPCAMDEED* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00263 490 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 107 487 IPR044653 GO:0003700
Phac6g00263 490 ProSiteProfiles Zinc finger C2H2 type domain profile. 113 135 IPR013087 -
Phac6g00263 490 MobiDBLite consensus disorder prediction 437 452 - -
Phac6g00263 490 Gene3D Classic Zinc Finger 50 135 - -
Phac6g00263 490 MobiDBLite consensus disorder prediction 129 189 - -
Phac6g00263 490 MobiDBLite consensus disorder prediction 349 391 - -
Phac6g00263 490 Pfam C2H2-type zinc finger 398 422 - -
Phac6g00263 490 Pfam C2H2-type zinc finger 52 72 - -
Phac6g00263 490 Pfam C2H2-type zinc finger 113 137 - -
Phac6g00263 490 MobiDBLite consensus disorder prediction 414 461 - -
Phac6g00263 490 ProSitePatterns Zinc finger C2H2 type domain signature. 400 420 IPR013087 -
Phac6g00263 490 ProSiteProfiles Zinc finger C2H2 type domain profile. 398 425 IPR013087 -
Phac6g00263 490 MobiDBLite consensus disorder prediction 377 391 - -
Phac6g00263 490 ProSitePatterns Zinc finger C2H2 type domain signature. 52 72 IPR013087 -
Phac6g00263 490 MobiDBLite consensus disorder prediction 144 170 - -
Phac6g00263 490 MobiDBLite consensus disorder prediction 171 189 - -
Phac6g00263 490 MobiDBLite consensus disorder prediction 72 94 - -
Phac6g00263 490 SUPERFAMILY beta-beta-alpha zinc fingers 49 135 IPR036236 -
Phac6g00263 490 SUPERFAMILY beta-beta-alpha zinc fingers 396 424 IPR036236 -
Phac6g00263 490 ProSiteProfiles Zinc finger C2H2 type domain profile. 50 77 IPR013087 -
Phac6g00263 490 SMART c2h2final6 50 72 IPR013087 -
Phac6g00263 490 SMART c2h2final6 113 135 IPR013087 -
Phac6g00263 490 SMART c2h2final6 398 420 IPR013087 -
Phac6g00263 490 ProSitePatterns Zinc finger C2H2 type domain signature. 115 135 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00263 52 192 C2H2 Transcription Factor Family AT2G26940 31.081 4.11e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac6g00263 zf-C2H2_6 1.6e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00263 - - gmx:102664324 464.151