Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00262 ATGGCCACAACAGCAAAGAATGTGGTGGTGATTCAGGATGCATCTAAAGTACTTAATTTAAGAGTTTTTTATTGGATCATAAATGCCTTGTCACTCGAGCCTGATGATATGGTGACCGTGGTTGCAATCCTGCATGAGGTTCATACTCCTATGGGATACAAAATCACGGTGGATAACCGGTTGCTCGGGGTAAACCAGAGAATCATCGACAACGTACTTGCAAACAAGAAAGAAGAGTACCTGAACAACGAGGAACTGGCTCAGATTGCCAAACAATATGAATCAAATAAGGTTGGATTGAAGATAAAGCTGTTTACAGGATCTCCACTAAAAGAAGTGGCTTTAGAAGTAGCCATAGACCTACAGGCAACTTGGGTGATACTTGACAGGAAAATGAAGAAAGATGGGGAGTTTTTCCAGCAGAGGCTTTCTTGTGGTATATCTATATTAAAGAGTAATGATCGGATTCTTCGACTAAGAGGGCCTTTAAATCTTCCAGATGAAATACCATGTAACAGCCATGACGCATATGATGAAAGTTTACCAAGTGTTCCATATAAACATCTTTTCGACATTGATGCTTTCCCCAAGAGAAAACTTGAAGATGGTGAACAGAACCAGATGCAAATTAGGCCCTATGAGGGTTGCTCGAATGACAAAACCAATATTAATGAAAAAATATATCCGACAAGTCCTAATCACCTGAGAATGGATGGAACAGAAATAAATAGCATGCAAATGACAGATAAAATAGAAAGAGCTGAGCAAGGCCACGATCAAAAACAGATCCAAAGCATGCCCCTTGAGATTGAGGGGGACACAACAATTATGATCAAAACTGATCAAGCAACTGCTGAGGAAATAGCTGATCAACCGAGAAAACATGAAGAAAAGGCAAACAACATCATCCCTGGTGAGAATTGGGACTTGAGTAATCCAACAAAGAGTGAAGAAATGATTGATCAACCAAAAGATGATCCGCTTAGTCAGAATCATGCACAGACACTGAGCATTTTCAGTGGTGCTATATTGGATGATGGAGAGCAAGAGAAAAGTATTTTAGAAAATGCAATGTACATTTTCTGCTCTCTCTGCAAAACTAGACGACCTAATATTGGGTGCCAAAAGGAATTTAGTTATGAAGAACTCCTAGCAGCCACAGATGCATTTTCATTGAAGAACTGTCTCTCCCAAAGCGGATCTCTCTTCACTTTCAAAGGCCAGGTGGAGGGAGGGATGACAGTAGTGGTTAAGCAGCATGAAGTAACCAACACTCAAGTAAGGGAGAAAGTGAAGTCAGAAATCCAAACCATCCTCAAAGCTACACATAAGAATGTGATTACTCTATTGGGCTCATCTACAACAGAATCTTTCCTGTTTACTGTATATGAGTATGCTTGCAATGGTTCACTTGACAAGTATCTATCAAAAGAAAGCTCCAGATCATTGGCCTGGAAAGAAAGGGAAAGAGTGGCAATAGGCCTTGCCAGAGGCCTTAAGTACCTACATGACAATAACATTGTTCATTGCAATATAAAACCAAGCAATATTCTTCTAACCCATGACTTCAATTCACTGATTGGAGATTTCAACTTTGGAAAAGAACACCAATTGAAGTCTTACAAAACTAAAAACAAAGAGAATTATGAATACCTAGCACCAGAATACCGGGAGAAAGGGAAATCATCATCAAAGACAGATGTATACTCATTTGGTGTGGTTATTTTAGAGTTGATCTCTGGGCGAAGGACTACGGATTTCACGTCAGAAGATAAAAGCCTTGTTGAATGGGCAAAGCCTTTACTTAAAAAGAAGAATTACTCAGAACTGGTGGATCCCATAATCAGAAACTCCTACGAAGAGGATCACCTTCGTTGGATGGTCAAAGTAATAACAGAATGTTTGGAAAAGAATCCTAAGAAAAGGTTATCAATGAATGTGGTTGTTTCTGAATTACAAGGCATAGCAGACAGTGAACTCTACCACATGACAGAAGATATTACTTCAGCTATATCAGATTCGAGAAGTGTGTCAGAAACAAATGGTTCACAAGATGTAGGTCCAATAATAAATAAAGCTGATCAGCCAAACCAGGAAGTCGAGCAAAGTGAGAGCATACTCTCTGGGGAGAAAAACGAGTTAAGACTAACAGTTGAGAATAATCTCTTTTACATAGCAAACCAGGGAAACTCTGATAAACTGAGACATAATGAAGAACAGAAGCAAAGCAGGTCCCGGGGGGAGGAGTGGAGCTCAGGAAAGATGATAACAAATGACCACAGAATAGACGAGACAGAAGTTGATCAGCTGAATAAGTTTGAAGAACCGATTCTAAGCCCACCCCATATGGAGGGCATCACAACACAAAAAATTAGTGTTGAGAACTTGCAGGATGGATGTCAAGGTGAAACAATTTTGGAGAATTCGAAGTCCTCTGCATGCTCTATTTGCAGAAGTAGAAGACCAAACAAAACATGGTCAAAAGATTTTACTTATGATGAACTTGTAGAAGCCACAGAAGGATTTTCCACTCAGAACTCTCTATCTGAAAATGAAGATGGACCTACTTTCCAAGGCCTGCTAGAGACACGGGTAAAAGTAGTTGTTAAGAAATATCAAGTTAATACCTCCCAAGAACAGAAGATAATAAAATCAGAAGCAAAGCTGCTCATCAGTGCTAGTCATAAAAATGTGGTCATGCTCTTGGGTTTATGTACAAATAAAAGCCAACTCTTGGTTGTGTTTGAGAAAGTATGCAACGGTTCACTTGACCAGTACCTAACAAGGGGAAGTTTCCAGTTATTGACTTGGAAGCAAAGGCTGAAAGTAATAATGGGTACTGCCAGAGGTTTAAAGTACCTACATGGGAAAGACATAATCCATGGAAATATAAAACCAAGTAATATTCTTCTAACACACGAGTTTGAACCACTGATTGGAGATTTCCACTTCGGACAAGAGAAAGTTGGACCAAAGAAATCCAGCAAAGATAAAAGTGTAAGAAATTCTGGATATGCAGCACCTGAGTATCTGGAGAATGGAAAACTATCAAATAAGACAGATGTCTACTCCTTTGGAGTGGTTGTTTTGGAGCTCATCAGTGGCCGGAGGGCTGCGGACAAATTACCAGATGGAAAAAGCCTTGTTAACTGGGCCAGGCCCCTACTGACAGGAAAGAAGTACCCACAGTTGTTGGATGCGAAAATGAGTAACTCCTATGAAGAAGAAAAACTTGTATGGTTGGTCCAAGTTACAGAACAGTGTCTCAGAAAGAATCCTAAGGATAGATTTTCAATGAATGTGGTTCTATCTACCTTGCAAGGCATAGGAGAATCAGAAGAGTGTTGTGTAATTGAAGATTCTTCTCTAGAAAAGTCATATCAAAATGGTCTTGCCATGAGTAGTACACAAGGTCTAATGAAGGCTGATCAAGTGAAGAAACAGGAACAAGAATTGATTGACAGAAACCAATACAAGCAGGAAAACAGTCCAATATTGACAGCCAAAACCAACCACATGGAAGGTCATAGAAATGAAGATCAGATGATACAGGGTGGAGAAGATGTGCAGAGGAATCCCTATATGTTCGGGGTAAGTGCTATCAGCAATGACATGATTGATCAGTTAAACCCTGACCAACAATTCCAGGAAAAACTGCACATTAAGGGAAGCTTTGACATAGAAGAAACGAATAAAAAAGTAGATAAGCAACAAGAGGTGAGCAAGGATAAAAAACAAATACAGGGAAGCTGTGATGATAGTTTATTGAATGGGAATGAAGGCAAAATCATTTTGGAAAGTTCAAATTCTTCTGCTTGCTCAATCTGCAAAAGTAGGCGACCAAACAGTGAATTGCAAAGGAAATATACTTATGAAGAGCTTCAAGCTTCTACAGAAGGATTTTCAGTAAAGTACTCCCTACGTGAAGGTGAATATGGACCTGCTTTCAGAGGCCAGCTAGAGAATAACCAGGAAATAGTTATTAAGCAACATGCATTCACAAGCTTACAGGAGCAGAAGGTGTTCATGTCAGAATTCGAAGTGCTTATAAATGCCAGACATGAAAACGTGATCATGCTGTTGGGTTCATGCATACGATTAAGTCAACTGCTAATTGTATATGAGAAGGCATGCAACGGTTCACTTGACCGGTACTTATCAAGAGAAAATGGAAGAACACTGACTTGGGGAGAAAGGGTGAAAGTTGCAATAGGTGTTGCCAGTGGTCTAAACTATCTACATGAGAATAATATAGCACATGGAGGAATAAAACCAAGTAACATTCTTCTAAACCATGAGTTGAAACCACTGGTAGGAGACTTTGTGTTTGGAAAAGAAAGATGTGAATTGAAAAATCTCTGCAGACTTAAAAGTATGAGGAATTGTGGACGCACTGCACCAGAGTGTCAGGAGAGTGGAAAACTATCGACTAAGGCAGATGTATACTCTTTTGGTATAGTTCTTGTGGAGTTGATCACTGGCCGTATGCTTACAGAAAAAATATCAGGACAGAGATGCCCTACTGAATGTATAAGGTCACTTCTTGAAGGACGAAAGTTTCTACAGTTGGTAGATCCCAAAGTCAGCAGCTCCTATAATGAACAAGAACTAGTTTCATTGGTCCACGTAATAGAAAAGTGTCTGAGAAAGAATCCAAAAGAAAGATCCACAATGAATACGGTTGTCTCTGCACTGCAATCTATGGTAGATTGCAGTGACATACATGTAAAGGAGGACTTTTCATCACAAAACTCGAATGTTTCAGAAGTAACACAGACAAAAGTGGATGAGGAACCACCAAATGAAGAATGTTTAGACATGGAGATTAGTGAAGAAAGAGAGCACAACATAAGTTGTAGTGAAAGCAATGGAACAGAAATATGTCAAGGGTGTGACAGCAACACAACTTCTTGTGAAAATAGAAAGGAAACAGAAGAAAAAGAAAGCTTGAGCACCAAGGTATGTTGGGAAGGGTGCTTATCTTATGGTGGAGCTAAAGAATTTTATCTTGAAGGGATCAAAGAGTACACAGCTTGTGAAGAACTTTTCGGCTTTTGTGATTTAATTTGA 5070 0.3945 MATTAKNVVVIQDASKVLNLRVFYWIINALSLEPDDMVTVVAILHEVHTPMGYKITVDNRLLGVNQRIIDNVLANKKEEYLNNEELAQIAKQYESNKVGLKIKLFTGSPLKEVALEVAIDLQATWVILDRKMKKDGEFFQQRLSCGISILKSNDRILRLRGPLNLPDEIPCNSHDAYDESLPSVPYKHLFDIDAFPKRKLEDGEQNQMQIRPYEGCSNDKTNINEKIYPTSPNHLRMDGTEINSMQMTDKIERAEQGHDQKQIQSMPLEIEGDTTIMIKTDQATAEEIADQPRKHEEKANNIIPGENWDLSNPTKSEEMIDQPKDDPLSQNHAQTLSIFSGAILDDGEQEKSILENAMYIFCSLCKTRRPNIGCQKEFSYEELLAATDAFSLKNCLSQSGSLFTFKGQVEGGMTVVVKQHEVTNTQVREKVKSEIQTILKATHKNVITLLGSSTTESFLFTVYEYACNGSLDKYLSKESSRSLAWKERERVAIGLARGLKYLHDNNIVHCNIKPSNILLTHDFNSLIGDFNFGKEHQLKSYKTKNKENYEYLAPEYREKGKSSSKTDVYSFGVVILELISGRRTTDFTSEDKSLVEWAKPLLKKKNYSELVDPIIRNSYEEDHLRWMVKVITECLEKNPKKRLSMNVVVSELQGIADSELYHMTEDITSAISDSRSVSETNGSQDVGPIINKADQPNQEVEQSESILSGEKNELRLTVENNLFYIANQGNSDKLRHNEEQKQSRSRGEEWSSGKMITNDHRIDETEVDQLNKFEEPILSPPHMEGITTQKISVENLQDGCQGETILENSKSSACSICRSRRPNKTWSKDFTYDELVEATEGFSTQNSLSENEDGPTFQGLLETRVKVVVKKYQVNTSQEQKIIKSEAKLLISASHKNVVMLLGLCTNKSQLLVVFEKVCNGSLDQYLTRGSFQLLTWKQRLKVIMGTARGLKYLHGKDIIHGNIKPSNILLTHEFEPLIGDFHFGQEKVGPKKSSKDKSVRNSGYAAPEYLENGKLSNKTDVYSFGVVVLELISGRRAADKLPDGKSLVNWARPLLTGKKYPQLLDAKMSNSYEEEKLVWLVQVTEQCLRKNPKDRFSMNVVLSTLQGIGESEECCVIEDSSLEKSYQNGLAMSSTQGLMKADQVKKQEQELIDRNQYKQENSPILTAKTNHMEGHRNEDQMIQGGEDVQRNPYMFGVSAISNDMIDQLNPDQQFQEKLHIKGSFDIEETNKKVDKQQEVSKDKKQIQGSCDDSLLNGNEGKIILESSNSSACSICKSRRPNSELQRKYTYEELQASTEGFSVKYSLREGEYGPAFRGQLENNQEIVIKQHAFTSLQEQKVFMSEFEVLINARHENVIMLLGSCIRLSQLLIVYEKACNGSLDRYLSRENGRTLTWGERVKVAIGVASGLNYLHENNIAHGGIKPSNILLNHELKPLVGDFVFGKERCELKNLCRLKSMRNCGRTAPECQESGKLSTKADVYSFGIVLVELITGRMLTEKISGQRCPTECIRSLLEGRKFLQLVDPKVSSSYNEQELVSLVHVIEKCLRKNPKERSTMNTVVSALQSMVDCSDIHVKEDFSSQNSNVSEVTQTKVDEEPPNEECLDMEISEEREHNISCSESNGTEICQGCDSNTTSCENRKETEEKESLSTKVCWEGCLSYGGAKEFYLEGIKEYTACEELFGFCDLI* 1690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00262 1689 SUPERFAMILY Protein kinase-like (PK-like) 376 672 IPR011009 -
Phac6g00262 1689 ProSiteProfiles Protein kinase domain profile. 842 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00262 1689 ProSiteProfiles Protein kinase domain profile. 1301 1569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00262 1689 MobiDBLite consensus disorder prediction 213 229 - -
Phac6g00262 1689 FunFam Proline-rich receptor-like protein kinase PERK8 1263 1376 - -
Phac6g00262 1689 MobiDBLite consensus disorder prediction 673 698 - -
Phac6g00262 1689 MobiDBLite consensus disorder prediction 729 753 - -
Phac6g00262 1689 MobiDBLite consensus disorder prediction 213 238 - -
Phac6g00262 1689 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 466 665 - -
Phac6g00262 1689 PANTHER OS01G0253100 PROTEIN 766 1112 - -
Phac6g00262 1689 ProSiteProfiles Protein kinase domain profile. 390 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00262 1689 SUPERFAMILY Protein kinase-like (PK-like) 1284 1565 IPR011009 -
Phac6g00262 1689 SUPERFAMILY Protein kinase-like (PK-like) 825 1110 IPR011009 -
Phac6g00262 1689 Gene3D Phosphorylase Kinase; domain 1 804 916 - -
Phac6g00262 1689 Gene3D Phosphorylase Kinase; domain 1 1265 1375 - -
Phac6g00262 1689 MobiDBLite consensus disorder prediction 303 328 - -
Phac6g00262 1689 Pfam Protein tyrosine and serine/threonine kinase 410 652 IPR001245 GO:0004672|GO:0006468
Phac6g00262 1689 Pfam Protein tyrosine and serine/threonine kinase 854 1105 IPR001245 GO:0004672|GO:0006468
Phac6g00262 1689 Pfam Protein tyrosine and serine/threonine kinase 1304 1565 IPR001245 GO:0004672|GO:0006468
Phac6g00262 1689 Gene3D Phosphorylase Kinase; domain 1 364 465 - -
Phac6g00262 1689 MobiDBLite consensus disorder prediction 732 753 - -
Phac6g00262 1689 Gene3D Transferase(Phosphotransferase) domain 1 918 1128 - -
Phac6g00262 1689 Gene3D Transferase(Phosphotransferase) domain 1 467 677 - -
Phac6g00262 1689 Gene3D Transferase(Phosphotransferase) domain 1 1378 1593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00262 Phac-Chr6 6054048 6067893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00262 378 676 Trihelix Transcription Factor Family AT5G38560 36.218 1.02e-52 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phac6g00262 PK_Tyr_Ser-Thr 7.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00262 - - vun:114188408 2424.43