Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00261 ATGGCTGTTACCTTCTCAAATCTCCACACAGACACAGGCCTCAAGTCCCTCAACGACTTTCTCTCTGGGAAGACCTACGTTTCTGGGGATCAGTTCACAAAGGACGACATCAAAGTGTACGCTGCTGTTTTGGAGAAGCCAGGCGATGCTTTCCCCAGTGTTGGCAAGTGGTACGAGGTTGTTTCATCTAACCTTGCTGCAAGCTTCCCTGGCAATGCTCAAGGAGTGAGATTCAGTGGCAAAGCTTCTGCTCCAGAGGCTGCTCCTGCAAAACCGGATGCTTCTGCTGCTGAAGATGATGATGACCTTGATCTCTTTGGTGATGAGACTGAGGAAGACAAAAAGGTGGCAGAGGAAAGGGAGGCTGCTAAGAAGTCTACCAAGAAGAAAGAGAGTGGAAAATCTTCTGTTCTGCTAGATGTTAAGCCTTGGGATGATGAGACAGACATGAAGAAGCTGGAAGAGGCTGTCCGCAGTGTTGAGATGCCAGGTCTATTGTGGGGAGCATCCAAACTGGTTCCTGTTGGTTATGGGATCAAGAAGTTGCAGATCATGTTAACCATTGTTGACGACCTTGTATCTGTGGACTCCCTTATTGAGGAGAAACTGACAGTTGAGCCCATCAACGAGTATGTACAAAGCTGTGACATTGTTGCATTCAACAAAATTTAA 672 0.4717 MAVTFSNLHTDTGLKSLNDFLSGKTYVSGDQFTKDDIKVYAAVLEKPGDAFPSVGKWYEVVSSNLAASFPGNAQGVRFSGKASAPEAAPAKPDASAAEDDDDLDLFGDETEEDKKVAEEREAAKKSTKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEMPGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEKLTVEPINEYVQSCDIVAFNKI* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00261 223 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 99 107 IPR001326 GO:0003746|GO:0005853|GO:0006414
Phac6g00261 223 SMART EF1_GNE_2 134 223 IPR014038 GO:0003746|GO:0006414
Phac6g00261 223 MobiDBLite consensus disorder prediction 78 129 - -
Phac6g00261 223 SUPERFAMILY eEF-1beta-like 131 223 IPR036219 -
Phac6g00261 223 Gene3D - 5 63 - -
Phac6g00261 223 SUPERFAMILY GST C-terminal domain-like 10 65 IPR036282 -
Phac6g00261 223 CDD EF1B 132 223 IPR014038 GO:0003746|GO:0006414
Phac6g00261 223 MobiDBLite consensus disorder prediction 109 129 - -
Phac6g00261 223 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 212 223 IPR001326 GO:0003746|GO:0005853|GO:0006414
Phac6g00261 223 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 223 - -
Phac6g00261 223 Pfam EF-1 guanine nucleotide exchange domain 136 223 IPR014038 GO:0003746|GO:0006414
Phac6g00261 223 Gene3D - 127 223 IPR014717 -
Phac6g00261 223 FunFam Elongation factor 1-beta 1 like 128 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00261 Phac-Chr6 6040311 6042666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00261 1 223 Eukaryotic Initiation Factors Gene Family AT5G12110 71.491 6.12e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00261 K03232 - gmx:100306132 326.25