Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00246 ATGGCCCTTGGTATGGTGGGTGAGGCTCTTATCTCTGCTTGTATGGAGATCTTGGTAGAAAGAATAGCTTCTCGAGAGTTTCGAGATTTCTTCTCCAGTACAAAGCTGGATATCTGTTTGTTGGATGAGTTGAAGATAAAGCTATTGGCAGTTAATGCTGTGCTCAATGATGCTGAGGAGAAGCAAATCACTGATCCTGCAGTGAAGAAATGGCTTGATGAGTTGAGGGATGTTGTCTTAGATGCAGAAGATTTGTTGGATGAAATCAATACACATGCTTTGAGACGCACGTCTGAAGGAGGATCTAGAACATTTGCTACCAAGGTAAGATCTTTGCTTTCTTCTAGCTTTAAAAACTTCTATAAGGGTATGAATTCCAAGTTTGAGGCAATATCTAGAAGGCTAGAACATTTTGTTAGGCAAAAAGATATTCTTGGTTTGCAAAGTGTTACTAGGAGAGTCTCTTATAGAACAGTAACAGATTCATTGGTTGAATCTGTTGTGGTTGCTAGAGAGAATGACAGGGAGAAGCTACTGAGCATGCTTCTATGTGATGATGGTGATGGCATGTCTAATGATATAGAAGTGATCACAGTATTGGGCATGGGGGGTCTGGGAAAAACAACCCTTGTTCAATGCCTTTATAATGATAGTGAAGTGCAGAAACATTTTGATTTTACAGCTTGGGCATGTGTGTCAGATGATTTTGATATTCTCATGGTAACGAAGAAAATTGTTGAATCTCTCACATCGGAAGATTGTCACATTACTAATCTTGATGTTCTTCGTGTTGAATTGAAGAATACCTTAAGAGATAAGAAATTTTTGCTTGTGCTTGATGACCTTTGGAATGAAAAGTATAACGATTGGCATCACCTAATAGCACCTTTTAGAAATGGGAGAAAGGGAAGTAAAATCATTGTAACAACCAGACAACAAAGAGTTGCACAGGTCACACATACATTTCCCACTTATGAGCTGAAACCTCTTAGTGATGAAAATTGCTGGCGCATACTGGCCAGACATGCATTTGGAAGTGAAGGTTACCACAATTATCCAATCCTAGAAGAAATTGGTAAAAAAATTGCAAAAAAATGTAATGGTCTACCATTGGCAGCTAAAACATTGGGAGGCCTTTTGAGATCAAATGTTGATGTTGGGGAATGGAATAGAATTCTGAACAGCAATTTGTGGGCACATGATGATGTTTTACCAGCTTTGCGTATAAGTTATTTCCATCTTCCAGCACATTTGAAGAGATGTTTTGCTTACTGCTCTATTTTTCCAAAACAACATTTGTTGGACAGGAAGGAAATAATTTTGTTATGGATGGCTGAAGGCTTTCTTCAACATGTTCATGAAGAGAAAGAAATGGAATCAGTAGGTAACGACTGCTTCAATGAGTTATTATCTAGATCCTTAATTCAAAAAGACAATTCTGTTGCAGAGGAAAATTTTCGAATGCATGACCTCATCTATGATTTGGCTAGACTTGTGTCTGGAAGAAGTTCTTATCACTTTGATGGCAGTGAAATCCCAAGAACTGTTCGCCATTTATCATTTCTCAGAGAGATGTTTGATATCTCTGAAAAGTTTGAGGGCTTGTATGAGCTGAAGTGTTTGCGGACCTTCCTACCACGATTGTCATATCCATATGTACACTGTTACTTGACCAAAATGGTATCACATGGTTGGTTGCCAAAACTAAGATGTTTGAGAATACTTTCATTGTCTAAATACACAAATATAACTGAGTTGCCTAATTCGATTGGCAATTTGTTGCATTTGAGGTATCTAGATCTTTCCTACACTTCAATTGAAAGCTTGCCCGATGAAACATTTATGCTTTACAATTTGCAAACTTTGATATTATCAAATTGTGAATCTCTTATTCAATTGCCTCAGCAGATAGGAAATCTGATTAACTTACGCCACCTTGACATCAGTGACACTAACTTGCCAGAGATGCCAACACAAATATGCAAATTACAAGAACTCCGTACCTTGACAGTTTTTATTGTTGGAAGACAAAACGGACTAAGTATTAGAGATTTATCAAAATTTCCTTATCTTCAGGGCAAGCTTTCAATTATGAACCTGCAAAATGTTGTCAATCTTGTGGACGCTTTTCAGGCAAATTTACAGAAAAAAGAGCAGATTGAGGAGCTTATTCTAGGATGGGACAGTGATCCACAAGAACCGCAGTTTCAAAAAGATGTACTTCACAACTTGCAACCATCAACAAATTTGAAGAAACTCAATATCAAATATTATGGTGGCACTTCCTTTCCAAATTGGATTGGACATTTTTCATTTTCAAAGATCATAGTCCTTACCGTAAGTGATTGCAACAATTGCTTGTCACTTCCACCTTTTGGACAACTACCTTCGCTTAAGGAGCTTGTTATCAAAAGGATGAAAATGGTGAAGAAAGTTGGTCATGAGTTCTACGGTAGCAGTGTAGGCTCACAGTTGCTTCAGCCATTTCAATCACTAGAGAATCTGGAATTTGAAGATATGTCAGAGTGGCAGGAATGGCTACCATTTGAGAGTGAAGGCAGAAACTTTCCCTTTCCATGTCTTAAGACTTTGTACCTGTACAAGTGCCCCAAGCTAAAAGGAACCTTGCCAAGTCATTTACCTTCATTGACAAATGTGATTTTCTCAGAGTGCAACCAGCTGGTGACAAAATTATCTGATGTGCATTGGAATACATCAATTGAAGCAATACATATTAGAGAGGGACAGGAAACCTTGTTGTCTATGCTTGACAACTTCTCTTGTTGCGAACTATTGATTGAAAAGTGTGATAGCTTACAGTGTTTGCCCAGAATGATACTTAGTGCAAACTGTCTTCAAAGATTGACTCTTTCAAATATCCCATCTTTGATTTCCTTCCCAGCTGATTGTTTGCCCACATTATTGCGATCACTTGACATTTGGCATTGTAGAAATTTAGAGTTCCTATCTCACAATACAAGGCCCAAATTCACATCACTTAAAACACTGAGAATATGGAATAGTTGCAGTTCCCTGACATCGTTTTCATTAGCTTGGTTCCCTGTCCTTCAAGAGCTTTATATCCGTTTTATTCCCAACTTGGAAGCAATTACTACTCAAGGGGGAGAAGCAGCTCCCAAATTAGTTGATTTTATTGTCACTGATTGTGAGAAACTTAGATCACTGCCAAATCAAATTGATTTCCCTTCCCTTGAACACTTGGACCTATCTGGCCTTCCCATGCTAGAATCATTGTCTCCAAGGTGTCTGCCTTCTTGTTTAAGATCACTTCATGTTGATGTTGGAATACTATCATCTATATCCAAACAAGAGTTAGGTTTGCAATTCCAACGCCTATCTTCTTTGTCACATCTTTTAGTCAAGGGTCTTGGTGATGAAGATCTTGTTAACACGCTTTTGAAGGAGCAGTCCCTGCCTACTTCTCTAGAATATCTGTTCCTAAATAATTTCAGTGGCTTAAAGTTGTTGGAAGGAAAAGGGCTTCAAAGTCTCACTTCTCTCCAAATGCTTAACATATACAATTGTCCAAGTATTGAGTCCTTACCTGAGGATCAACTTCCATCATCTCTTCAAGTACTAAGTCTTAGGGAGTGCCCTTTACTGGAAGCAAGATATCAAAATCATAATGGGAAATACTGGTCTAAAATTGCTCACATTCCTGCAATCAAGATAAATGAAAAAGTCATAATATGA 3714 0.3805 MALGMVGEALISACMEILVERIASREFRDFFSSTKLDICLLDELKIKLLAVNAVLNDAEEKQITDPAVKKWLDELRDVVLDAEDLLDEINTHALRRTSEGGSRTFATKVRSLLSSSFKNFYKGMNSKFEAISRRLEHFVRQKDILGLQSVTRRVSYRTVTDSLVESVVVARENDREKLLSMLLCDDGDGMSNDIEVITVLGMGGLGKTTLVQCLYNDSEVQKHFDFTAWACVSDDFDILMVTKKIVESLTSEDCHITNLDVLRVELKNTLRDKKFLLVLDDLWNEKYNDWHHLIAPFRNGRKGSKIIVTTRQQRVAQVTHTFPTYELKPLSDENCWRILARHAFGSEGYHNYPILEEIGKKIAKKCNGLPLAAKTLGGLLRSNVDVGEWNRILNSNLWAHDDVLPALRISYFHLPAHLKRCFAYCSIFPKQHLLDRKEIILLWMAEGFLQHVHEEKEMESVGNDCFNELLSRSLIQKDNSVAEENFRMHDLIYDLARLVSGRSSYHFDGSEIPRTVRHLSFLREMFDISEKFEGLYELKCLRTFLPRLSYPYVHCYLTKMVSHGWLPKLRCLRILSLSKYTNITELPNSIGNLLHLRYLDLSYTSIESLPDETFMLYNLQTLILSNCESLIQLPQQIGNLINLRHLDISDTNLPEMPTQICKLQELRTLTVFIVGRQNGLSIRDLSKFPYLQGKLSIMNLQNVVNLVDAFQANLQKKEQIEELILGWDSDPQEPQFQKDVLHNLQPSTNLKKLNIKYYGGTSFPNWIGHFSFSKIIVLTVSDCNNCLSLPPFGQLPSLKELVIKRMKMVKKVGHEFYGSSVGSQLLQPFQSLENLEFEDMSEWQEWLPFESEGRNFPFPCLKTLYLYKCPKLKGTLPSHLPSLTNVIFSECNQLVTKLSDVHWNTSIEAIHIREGQETLLSMLDNFSCCELLIEKCDSLQCLPRMILSANCLQRLTLSNIPSLISFPADCLPTLLRSLDIWHCRNLEFLSHNTRPKFTSLKTLRIWNSCSSLTSFSLAWFPVLQELYIRFIPNLEAITTQGGEAAPKLVDFIVTDCEKLRSLPNQIDFPSLEHLDLSGLPMLESLSPRCLPSCLRSLHVDVGILSSISKQELGLQFQRLSSLSHLLVKGLGDEDLVNTLLKEQSLPTSLEYLFLNNFSGLKLLEGKGLQSLTSLQMLNIYNCPSIESLPEDQLPSSLQVLSLRECPLLEARYQNHNGKYWSKIAHIPAIKINEKVII* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00246 1237 Gene3D - 410 498 IPR036388 -
Phac6g00246 1237 Coils Coil 41 61 - -
Phac6g00246 1237 PANTHER DISEASE RESISTANCE PROTEIN RP 42 843 IPR044974 GO:0006952
Phac6g00246 1237 Coils Coil 72 92 - -
Phac6g00246 1237 Gene3D - 149 322 IPR027417 -
Phac6g00246 1237 Gene3D - 40 134 - -
Phac6g00246 1237 Pfam Rx N-terminal domain 40 103 IPR041118 -
Phac6g00246 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 425 IPR027417 -
Phac6g00246 1237 Gene3D Ribonuclease Inhibitor 996 1231 IPR032675 -
Phac6g00246 1237 Gene3D Ribonuclease Inhibitor 533 914 IPR032675 -
Phac6g00246 1237 Gene3D - 329 409 IPR042197 -
Phac6g00246 1237 Pfam Leucine rich repeat 595 653 IPR001611 GO:0005515
Phac6g00246 1237 Pfam NB-ARC domain 191 394 IPR002182 GO:0043531
Phac6g00246 1237 FunFam Probable disease resistance protein At1g63360 411 498 - -
Phac6g00246 1237 FunFam Probable disease resistance protein At1g61300 150 321 - -
Phac6g00246 1237 SMART LRR_typ_2 640 663 IPR003591 -
Phac6g00246 1237 SMART LRR_typ_2 593 616 IPR003591 -
Phac6g00246 1237 SUPERFAMILY L domain-like 923 1222 - -
Phac6g00246 1237 ProSiteProfiles Leucine-rich repeat profile. 595 616 IPR001611 GO:0005515
Phac6g00246 1237 PRINTS Disease resistance protein signature 269 283 - -
Phac6g00246 1237 PRINTS Disease resistance protein signature 366 380 - -
Phac6g00246 1237 PRINTS Disease resistance protein signature 196 211 - -
Phac6g00246 1237 PRINTS Disease resistance protein signature 614 630 - -
Phac6g00246 1237 SUPERFAMILY L domain-like 487 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00246 Phac-Chr6 5797927 5803459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00246 193 801 WRKY Transcription Factor Family AT5G45050 22.424 8.18e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00246 - - gmx:100803330 2025.37