Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac6g00238 | ATGCAGTCACAGCGATACTACTATAACGTGTTCAACTTGAATAACCAAGACTCAACGATTGTGCCTGGTGATACTTTCAATTTCCGCATAAAAATTGTATATCACTCAGTTGACACAAATCCAGAAGGGTTGCAGAATCTATTTTCTTCATTATCAATTCCCTCTGATGATTTCTTCCGAGAGGGTCAAATTTTCTTACAGTCACTTTTTTCAGGCTTAAGCTTCTCCGTTGAATCCATTGATGAAATAACAGAAGGGGTAGTTTCTACAGTTCAAGAACTGTTTGAAGTTGGTAGCATTGATGATTTTCTCTCTTTGGAATCTCAACACCGAGTCATCCCTTTATATGTGACAATTATAATATTGGATTTTGGAATTCATGCAACTAGGGAAGAATCGTGGCAGGTTTATAGAATGAATCAGTCGAATGAAACCATAACAAAGACCTTCTTGAAGAAATGTACGGTCGTGGAAGGGAGTGATGATTGTTGCATCTGCTTAGAAGAGTTGAATATCAACTGCGAGTGCTACAGAATGCCATGCCATCATGAGTTTCATCTACAGTGTATTCTCACATGGCTCAAAACTAGTCGCGTCTGTCCCTTGTGTCGTTACTCTTTGCCAACCCTTGAAAACTAG | 639 | 0.3897 | MQSQRYYYNVFNLNNQDSTIVPGDTFNFRIKIVYHSVDTNPEGLQNLFSSLSIPSDDFFREGQIFLQSLFSGLSFSVESIDEITEGVVSTVQELFEVGSIDDFLSLESQHRVIPLYVTIIILDFGIHATREESWQVYRMNQSNETITKTFLKKCTVVEGSDDCCICLEELNINCECYRMPCHHEFHLQCILTWLKTSRVCPLCRYSLPTLEN* | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac6g00238 | 212 | ProSiteProfiles | Zinc finger RING-type profile. | 163 | 204 | IPR001841 | - | |
Phac6g00238 | 212 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 141 | 208 | - | - | |
Phac6g00238 | 212 | Pfam | Ring finger domain | 161 | 204 | IPR001841 | - | |
Phac6g00238 | 212 | CDD | RING-H2 | 163 | 204 | - | - | |
Phac6g00238 | 212 | SMART | ring_2 | 163 | 203 | IPR001841 | - | |
Phac6g00238 | 212 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 126 | 210 | IPR013083 | - | |
Phac6g00238 | 212 | SUPERFAMILY | RING/U-box | 156 | 209 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac6g00238 | Phac-Chr6 | 5608051 | 5608689 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac6g00238 | 125 | 208 | C3H Transcription Factor Family | AT1G18760 | 33.721 | 1.47e-13 | 65.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac6g00238 | - | - | pvu:PHAVU_006G017900g | 372.474 |