Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00237 ATGTCGACACTGCATCACTATTACAGTGTGACTAGGGTGAATGAAGAAGACACCACAGTTGTGCCTGGTAATTCTTTCAACTTCGAAATCAAAGTAATGTATCACTCAGCCGATACATTCCCAGATGGGTTACAGCATCAACTTTTACCAGCATCAATACTCTCCCAGGATTTCTTTCAAGAGGGTTCAATCTTCTTACAGACAGTGTTGACACTTTCACCCTTTGCCGTTGGATGTCCTGAGGAAATAGCAGAAGGGATTGTTTCTAATGTTCAAGCCATGTTCAGTGTTAACAGCGCTGCTGATTTTCTTTCTTTGGAATCATCCCAGGAATCTCCACAGCGAGTCATCCCTTTAACAGTGGCAATTATAATATTGAATTATGGAGACCAGGCAGCTAGTGAAGAGTACATGGAGACTTCTAGAAGGAATCAGAGGGTGATTTATAGAAGGAGTCCAAGGCTGAGTGCTAGAGCGAGGCAGCAGCAGAGTTCTAGAGTAAGTCAGCAGAGCTCTAGAGTGAGTCAGCAGAGTTCTAGAGTGAGTCAGAGCTCTAGAGTGAGTCAGCAGAGTTCTAGAGTGAGTCAGAGGCCGAGTTCTAGAGTGAATCAGAGGCAGAATTCTGCTGTGATTCATACTTCCGAGGAAGAAGCCATAATAAATACATTTTTGAAGAAATGTACTGTTATAAGAGGACGTGAAGATTGTTGTATCTGCTTGGAAGCTTTGAGTAACGATGCTGAGTGCTACACAATGCCATGCGAACACGCCTTTCATCTTCCATGTATTCTCACATGGCTCAAAACTAGTCATATGTGTCCCTTGTGTCGCTTCTCTTTGTCAACAGCAGGTGAAAACTTGCCAACAGCAGCTGAAAACTTGCCAACAACAGCTGCTGAAAACTAG 906 0.4349 MSTLHHYYSVTRVNEEDTTVVPGNSFNFEIKVMYHSADTFPDGLQHQLLPASILSQDFFQEGSIFLQTVLTLSPFAVGCPEEIAEGIVSNVQAMFSVNSAADFLSLESSQESPQRVIPLTVAIIILNYGDQAASEEYMETSRRNQRVIYRRSPRLSARARQQQSSRVSQQSSRVSQQSSRVSQSSRVSQQSSRVSQRPSSRVNQRQNSAVIHTSEEEAIINTFLKKCTVIRGREDCCICLEALSNDAECYTMPCEHAFHLPCILTWLKTSHMCPLCRFSLSTAGENLPTAAENLPTTAAEN* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00237 301 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 117 278 - -
Phac6g00237 301 MobiDBLite consensus disorder prediction 156 208 - -
Phac6g00237 301 MobiDBLite consensus disorder prediction 150 208 - -
Phac6g00237 301 Pfam Ring finger domain 235 277 IPR001841 -
Phac6g00237 301 SUPERFAMILY RING/U-box 235 283 - -
Phac6g00237 301 ProSiteProfiles Zinc finger RING-type profile. 236 277 IPR001841 -
Phac6g00237 301 SMART ring_2 236 276 IPR001841 -
Phac6g00237 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 285 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00237 Phac-Chr6 5568461 5569716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00237 179 280 C3H Transcription Factor Family AT1G18760 29.524 7.46e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00237 - - pvu:PHAVU_006G017800g 476.863