Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00210 ATGAAAATTATATTAAAAAGACATGAGAAGTCAAAGGATCATATTGACTATAAGATGAAGTTCTCAAGGCCCGCAAAATCCTCTGGAATTCGAAAGAGATCAAATGAGCAATACTTATCCAATAGTCCAAAATCAAGACAAAATGAACAATCTCCTATTGTACTAGAAGAACGGTCAAACCGACATACTGATAACCTTACTGGCAAAATCCCAAGAGGCTCAAGAGGTTTTGAAAGTTCAAAAAGGAGAAAGGTTAAAGAAGACTATACCATAAAATCAAAACCTAAACGGGGAGAAGATGTTTTTAGTTGTAATAAGAGGACTACTGAATGTCCTTTTAGTAAAGAACTAGAGCCAAGAAAGTGTCTTGCTGCATTGAAGAAGAAAAGAAAATTTGAAGACAATATCTTGGCTGACCAATTGGGCGATTACAAGGATTTTGTTCCTTCAAAGACAAATTTCAGAAATAAAGCTAGAAAAATTGATAACGTGAAGGATACAAAGCAAACTTCTAAAAAATGTCATCAATGTTTGAAAAAGGAAAGGACAGTGTTCGTACCTTGTACTAAATGTCCAAAAATATATTGTTTGTGGTGCATCAGGAAATGGTATCCCAATCTTACAATATCAGACATTTCACACGAGTGTCCCTTTTGCCAAAACAATTGCAATTGCAGTGTTTGCTTGGGCTCAACAGGAACGATTAAGACATCTAACAACAACATCACAGATGACGAAAAGGTTCAACATCTTCAATACATGATTGACTTACTCATTCCATTTATACAACATATTTGTGAAGAACAAACTCAAGAGCACGAGATTGAAGCTAAAATACAAGGAAAATCAAGCTCTGAGATTGAGATACCACAAACATCTTGTGAAAATGAACGTATCTATTGTGACCATTGTGCTACTTCATTTACTGATCTTTATCGAAGTTGTCCCGAGTGTTCCTTTGAAATCTGCCTCAACTGTTGCAAAGAAATCCGCAATGGAAGTATATCATCCCGGTCTGAAATGAAGTTTCAATATGTGAATAGGGGGTATGATTATATGCATGGTGGTGATCCATTACCAGTGTTTGGTAATTTAGGGACTTTAAGAGGTCATTCTAAGATATTTACCAAATGGAAGGCCAACAGTGATGGAAGTATTAGATGTGCACCCAAAGAAATGGGAGGATGTGGTGGCCCTGTAATGGAGCTGAAGCGCATTCTTTTAAATAGGTGGATATCAGACTTGGAAGCCAAAGCTCGTAACATGCTAAAAGGCTTTTCTAAAACTGAACAAACAACTCTTCAGAAAGAAGAAATATCAAGTTGCAATTCTAAGATAAGAGCAACTTTTAGAGATGGCACAAGTGATAATAACTTATACTCTCCATCATCAAGTGAACTCATAAATGAAGGGCTGCTTCTCTTCAGAAAACATTGGACTCAAGGTGAACCAATCATAGTTCGTGATGTTCTTAAGCAGGGTACAGGTCTTAGTTGGGAGCCAATGGTCACATTGCGAGCCCTATCTGAAAACGTGGCTCCAGGAATCAGCTCAAATATGACTGAATTGAAGGCCATTGATTGCCTTTCTTGTTGTGAGGTAGAAATCAATACTTGTACATTCTTCAAGGGTTATACACAAGGAAGAACACATCTAAACCTGTGGCCAGAGATGCTGAAGTTAAAAGACTGGCCTCCCTCTGACAAGTTTGATGATCTTTTGCCTCGCCATTGTGACGAGTTTATCCGCTGCTTGCCATTTCAAGAGTATTGTGATCCTCGAGCTGGGATCCTCAACCTTGCTGTAAAGTTGCCATCCCATGTTCTAAAGCCAGATCTTGGTCCAAAAACATATATTGCTTATGGGAATAAAGAGGAACTTGGCAGGGGAGATTCAGTAACAAAACTTCACTATGATATGTCTGATGCTGTGAATATTTTGATCCACACGACTGAGGTAACATTGAGTGATGAACAAAATTCAGTTATTCCAAAACTGAAAAAAACACACATGGCCCAAGATGAGAGAGAGGAACATGGTCGAGTAAGGGTCGATGAATGCCTGAATGAAGGACTTTGCAAAGAAAACAGAGAAGAATATAACTGTGCTATTGCTAAAGAATCTGGTGGTGCTCTTTGGGACATCTTTCGGAGAGAGGATACTGAAAAGTTAGATGCATATCTAAGAAAGCACTCTAAGGAATTTAGGCATACCTATTGCTCTCGAGTTGAAGAGGTTGTCCATCCAATTAATGACCAATGCTTTTACTTGACTTTGGAACACAAGAAGAATCTGAAGAAGGAGTTTGGTGTAGAACCTTGGACTTTTGAGCAACAACTTGGGGAGGCAGTATTTATTCCTGCTGGATGTGCACACCAAGTCAGGAATCTTAAGTCATGCACAAAAGTTGCTGTAGATTTCGTGTCCCCAGAAAATGTTCATATGTGCTTGCATTTAACTGAAGAGTTCCGTCGTCTTCCTAAGAATCACAAGGCCCGAGAAGATAAACTTGAGATACAGAAAATGATCGTCTATGCTATTGACAGTGCTGTCAAAGAATTAGAAGCTTTACGTTCTTGA 2580 0.3845 MKIILKRHEKSKDHIDYKMKFSRPAKSSGIRKRSNEQYLSNSPKSRQNEQSPIVLEERSNRHTDNLTGKIPRGSRGFESSKRRKVKEDYTIKSKPKRGEDVFSCNKRTTECPFSKELEPRKCLAALKKKRKFEDNILADQLGDYKDFVPSKTNFRNKARKIDNVKDTKQTSKKCHQCLKKERTVFVPCTKCPKIYCLWCIRKWYPNLTISDISHECPFCQNNCNCSVCLGSTGTIKTSNNNITDDEKVQHLQYMIDLLIPFIQHICEEQTQEHEIEAKIQGKSSSEIEIPQTSCENERIYCDHCATSFTDLYRSCPECSFEICLNCCKEIRNGSISSRSEMKFQYVNRGYDYMHGGDPLPVFGNLGTLRGHSKIFTKWKANSDGSIRCAPKEMGGCGGPVMELKRILLNRWISDLEAKARNMLKGFSKTEQTTLQKEEISSCNSKIRATFRDGTSDNNLYSPSSSELINEGLLLFRKHWTQGEPIIVRDVLKQGTGLSWEPMVTLRALSENVAPGISSNMTELKAIDCLSCCEVEINTCTFFKGYTQGRTHLNLWPEMLKLKDWPPSDKFDDLLPRHCDEFIRCLPFQEYCDPRAGILNLAVKLPSHVLKPDLGPKTYIAYGNKEELGRGDSVTKLHYDMSDAVNILIHTTEVTLSDEQNSVIPKLKKTHMAQDEREEHGRVRVDECLNEGLCKENREEYNCAIAKESGGALWDIFRREDTEKLDAYLRKHSKEFRHTYCSRVEEVVHPINDQCFYLTLEHKKNLKKEFGVEPWTFEQQLGEAVFIPAGCAHQVRNLKSCTKVAVDFVSPENVHMCLHLTEEFRRLPKNHKAREDKLEIQKMIVYAIDSAVKELEALRS* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00210 859 SMART cupin_9 574 824 IPR003347 -
Phac6g00210 859 ProSiteProfiles Zinc finger RING-type profile. 174 220 IPR001841 -
Phac6g00210 859 Pfam JmjC domain, hydroxylase 711 807 IPR003347 -
Phac6g00210 859 ProSiteProfiles JmjC domain profile. 593 824 IPR003347 -
Phac6g00210 859 FunFam Transcription factor jumonji domain-containing protein 456 833 - -
Phac6g00210 859 Gene3D Cupin 463 833 - -
Phac6g00210 859 MobiDBLite consensus disorder prediction 31 54 - -
Phac6g00210 859 MobiDBLite consensus disorder prediction 15 85 - -
Phac6g00210 859 SUPERFAMILY Clavaminate synthase-like 474 857 - -
Phac6g00210 859 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 32 858 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00210 Phac-Chr6 4798653 4802773 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac6g00210 JmjC 1.5e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00210 K15601 K21989 gmx:100801772 1238.4