Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00209 ATGGCAGCATGCTTGAATCCACCTAGGCTATCTAGTACTGAAGATGACTCTGTGATACTCTTCTCAACTTCTAATTCTCCTCAAGACTCCATTAGTCCTTCTTCTTCCTCTTTCCACCATTCACCGCCACCATCACTACATCAATTCAGAACTGCATATAAACTTTCTGTGAGAAATCTCTCCTACACTTTGCAGCCTTACAAGACCACTTCCTTTTCATTTTGTCACCAGAGTAAAAGACCAGAGCCCTTAAATATACTCAACTCAATCTCTTTTGTCACCAGAAGTTCTGAGATTGTTGTTGTCGCTGGTCCTAGTGGAACAGGAAAGTCTACCCTTCTGCGAATCATGGCAGGAAGGGTAAAAGATGAAGAATTTGATCCTAAAAGTATTTCAATCAATGATCAGCCTATGACTAGTCCAGCTCAGTTGAGGAAGATATGTGGCTTTGTGGCACAAGAGGACAATTTGCTTCCTATGCTGACTGTGAGAGAAACTTTGTTGTTTAGTGCAAAGTTTAGGCTAAAAGAAATGACACCAAAAGACAGAGAGTTGAGGGTAGAAAGCTTGTTGCAAGAGCTAGGACTTTTACATGTTGCACATAGTTTTGTTGGGGATGAAGAGAATAGAGGAATATCTGGTGGAGAGAGGAAAAGGGTGTCAATTGGAGTTGACATGATTCACAATCCTCCAATTTTGCTCCTAGATGAACCAACTTCAGGTCTGGACAGCACTTCAGCTTTGCAAGTCATAGAGTTACTGTCATCAATTGTTAAAGCAAAGCAAAGGATAGTGGTTCTTTCAATCCACCAACCCAGCTATAGAATATTGCAGTATGTTTCCAAGTTCTTGATCCTCTCTCATGGTTCAGTTGTTCACAATGGTAGCCTAGAACAACTAGAGGAAACCATAAGTAAACTGGGATTTCAAATTCCAACACAGCTGAATGCTTTAGAATTCTCTATGGAAATTATACGACGGTTGGAAGATTCCGGATCCATATATAAAACTTCCATAATTGAGGAAAAGGAGCCATTTCCACACCTCATGTGGCCAGAGGAAGAAAACTGTGGAATCCAAATTGCCCAATCACAATGTACAAAGGAAAGTTTTAAAAGTCTTTGTTACGCATACTTGATAGAGATACTGTTTTTGTGCTCAAGATTTTGGAAGATCATTTATAGAACAAAACAACTTTTCTTGGCCAGAACATTGCAAGCACTAGTTGGTGGCTTTGGTCTAGGAAGTGTTTATATAAAGATAACAAGGGATGAAGGAGGAGTTGCAGAAAGGGAACTCCCTCATCTGCACAGTTCTTGGAGCCTTCTTCCTCTTCTCAGGATACTTCATTCCAAAGGAAAGCATCCCAAAGTATTGGCTTTTCATGTACTACGTGTCCCTCTATAG 1407 0.4037 MAACLNPPRLSSTEDDSVILFSTSNSPQDSISPSSSSFHHSPPPSLHQFRTAYKLSVRNLSYTLQPYKTTSFSFCHQSKRPEPLNILNSISFVTRSSEIVVVAGPSGTGKSTLLRIMAGRVKDEEFDPKSISINDQPMTSPAQLRKICGFVAQEDNLLPMLTVRETLLFSAKFRLKEMTPKDRELRVESLLQELGLLHVAHSFVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALQVIELLSSIVKAKQRIVVLSIHQPSYRILQYVSKFLILSHGSVVHNGSLEQLEETISKLGFQIPTQLNALEFSMEIIRRLEDSGSIYKTSIIEEKEPFPHLMWPEEENCGIQIAQSQCTKESFKSLCYAYLIEILFLCSRFWKIIYRTKQLFLARTLQALVGGFGLGSVYIKITRDEGGVAERELPHLHSSWSLLPLLRILHSKGKHPKVLAFHVLRVPL* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00209 468 MobiDBLite consensus disorder prediction 22 45 - -
Phac6g00209 468 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 431 - -
Phac6g00209 468 Pfam ABC-2 type transporter 270 329 IPR043926 GO:0140359
Phac6g00209 468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 306 IPR027417 -
Phac6g00209 468 ProSitePatterns ABC transporters family signature. 212 226 IPR017871 GO:0005524|GO:0016887
Phac6g00209 468 MobiDBLite consensus disorder prediction 22 44 - -
Phac6g00209 468 Pfam ABC transporter 87 240 IPR003439 GO:0005524
Phac6g00209 468 SMART AAA_5 96 298 IPR003593 GO:0016887
Phac6g00209 468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 313 IPR003439 GO:0005524
Phac6g00209 468 Gene3D - 72 322 IPR027417 -
Phac6g00209 468 FunFam ABC transporter G family member 23 78 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00209 Phac-Chr6 4756253 4758491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00209 68 300 Calmodulin-binding Proteins AT2G36910 27.530 1.97e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00209 K05681 - pvu:PHAVU_006G013900g 800.045