Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00208 ATGACAAACAACTCCACGACAATCTCCATCTCCCAAATCTCCATATCTGGAGACTCAGATTCTGAATCCTCTTGGAACCACCACACTAACTTCTCCCATTTCCCTCACCTTTCATCACTACCACCACCACCACCTACCACATGGGAGGAGAATCTCCCTCTTACCACTCCACCCTCCAAGAAGCCACGTGGTAGACCCCCAGGCTCCAAGAACAAGCCCAAGTATGGTATGCCACAACCCCCCATGAAGATTCTTATAGTTAATGTCGCTCCAGGACATGACATCATTGAGACCATTCTTGATATAGCTCGTCGAGATCATGTCAGCCTCACCATCCTCAGTGCTTCCGGCAGTATCACCACCGTCACCCTCCGCCATGTCCCCACTGGTTCCTCCGCTGTCATGCTCCATGGACCCTTCAACTTGCTCTCCCTCACTGGCTCCTACTTATACAACAACCACCCTGGAGCTACTCCTCCTCCTTCCTTATCTTTTGGGATACATCTCTCTACCTCTAATGGTCGAGTCTTCGGTGGCCTCGTAGGTGGTAGGGTTCTTGCCGGTAACCATGTCAACTTGACCGTTTCTACCTTCAAAAACCCTGAAATTTACAAATATGTACCTCAAGGTATACAAGGAAATCATCATCATGATGATACCATCAACAACAATAACAACAAAACTTGTAACCATGACTCTAATAATTTCAACACAAGTGGCGACTTGTCAATGTTCAACGGTGCTAGTTTTGGGATCCGTGGAGGTGAATGA 771 0.476 MTNNSTTISISQISISGDSDSESSWNHHTNFSHFPHLSSLPPPPPTTWEENLPLTTPPSKKPRGRPPGSKNKPKYGMPQPPMKILIVNVAPGHDIIETILDIARRDHVSLTILSASGSITTVTLRHVPTGSSAVMLHGPFNLLSLTGSYLYNNHPGATPPPSLSFGIHLSTSNGRVFGGLVGGRVLAGNHVNLTVSTFKNPEIYKYVPQGIQGNHHHDDTINNNNNKTCNHDSNNFNTSGDLSMFNGASFGIRGGE* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00208 256 FunFam AT-hook motif nuclear-localized protein 17 81 214 - -
Phac6g00208 256 MobiDBLite consensus disorder prediction 1 79 - -
Phac6g00208 256 SUPERFAMILY AF0104/ALDC/Ptd012-like 81 204 - -
Phac6g00208 256 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 223 IPR014476 GO:0003680
Phac6g00208 256 MobiDBLite consensus disorder prediction 1 36 - -
Phac6g00208 256 CDD DUF296 83 188 IPR005175 -
Phac6g00208 256 MobiDBLite consensus disorder prediction 37 51 - -
Phac6g00208 256 ProSiteProfiles PPC domain profile profile. 79 218 IPR005175 -
Phac6g00208 256 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 199 IPR005175 -
Phac6g00208 256 Gene3D - 82 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00208 Phac-Chr6 4747503 4748273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00208 60 205 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.714 3.93e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00208 - - pvu:PHAVU_006G013800g 332.413