Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00195 ATGGCAGAGGAGAAGGAGCAGGAGGAGTTGGTGCCTTCTACCGTCACCGCCGAAGAAGTTAACCATGACGACTTCATTCTCAGCCAGGATCTGTTTTGCACACCAGATTACTTAACTCCGGAAAACCAGTTTCCTTTGAAAGGCTTCCATTCTAGCATCGACATGGAGGAGGAAGATGGCCCTTGCCCCAAGTCACCAGAGAAGCCTAGTACTTCCAAAACCAAGAGACGCCGAATGGATGATGGTATCTCAGGAGATACTCTCAGTTCTACGTCTTCTGGTGATGATCAGGCAGTTGTGGAACTTGGGAAGGACTTTGTTGAAGAGGAAGTCGAATATAAGCCGAGGGCTCGAAGTTATGTGTCACGTTCTGCAATTGCATTGCGTTACAGGGTTATGCCTCCTGCTTGCATTAGAAACAGCTTTATGATAAGCCTTTCGGAAGAGGAACTGTACCCTTATAGACTCCAAAATTCTAAATGTGCTGACCTCTTCCCTTCACTTACTCGTGGTAATGGTCTATCACGCTACCACACCGACTTTTATCAGTATGAGCGAATTGGTAGAGGAAACTTTAGCAATGTTTATAAGGTATTGAAGCGACTAGATGGCTGCTTGTATGCTGTGAAATGTACCACCAAGAAGTTGGGCAGTGGAAGAGAAAGGATTAAAGCTTATACGGAAGTTCAATCTATGGCTGCTATAGGTTTCCATGAGAACATTGTGGGATATTATTCTTCGTGGTCTGATAATGGACAACTGTATATTCAGTTGGAGCTATGTGATCACAGCTTATCCACTAAAAATTGCCCAGCATTGCTTACTGAACGACATGAAATAGAAGCTTTATATCAGGTTGCTTGTGCATTGCAATTTATACATGAGAAGGGAATAGCTCATCTTGATGTTAAGCCGGAAAATATTTATGTCAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTACTTGATAATAGCATGTTTATTGAAGAGGGTGATGCGCGTTACATGCCTCAAGAAATTTTCAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTCTCCCTAGGAGCTTCTATGTTTGACTTAATTCGTAGGTCACGCTTGCCAGAAGCAGAAACTCAGTTCTCTAACCTTAAAGAGGGAAATATGCCACACTTGCCGGGAGTTACTACGCAATTTCAGAACTTGCTTAAGGTCATGATGGACCCTGATCCTCTTAAGCGTCCTTCTGCTACAGAGATATTGGGAAATTCAATATTTAGAGGGCCCCTTAAAATGACATAA 1299 0.4242 MAEEKEQEELVPSTVTAEEVNHDDFILSQDLFCTPDYLTPENQFPLKGFHSSIDMEEEDGPCPKSPEKPSTSKTKRRRMDDGISGDTLSSTSSGDDQAVVELGKDFVEEEVEYKPRARSYVSRSAIALRYRVMPPACIRNSFMISLSEEELYPYRLQNSKCADLFPSLTRGNGLSRYHTDFYQYERIGRGNFSNVYKVLKRLDGCLYAVKCTTKKLGSGRERIKAYTEVQSMAAIGFHENIVGYYSSWSDNGQLYIQLELCDHSLSTKNCPALLTERHEIEALYQVACALQFIHEKGIAHLDVKPENIYVKNGVYKLGDFGCATLLDNSMFIEEGDARYMPQEIFNENYDHLDKVDIFSLGASMFDLIRRSRLPEAETQFSNLKEGNMPHLPGVTTQFQNLLKVMMDPDPLKRPSATEILGNSIFRGPLKMT* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00195 432 SUPERFAMILY Protein kinase-like (PK-like) 172 427 IPR011009 -
Phac6g00195 432 Gene3D Transferase(Phosphotransferase) domain 1 259 427 - -
Phac6g00195 432 Gene3D Phosphorylase Kinase; domain 1 156 258 - -
Phac6g00195 432 FunFam Wee1-like protein kinase 260 428 - -
Phac6g00195 432 ProSitePatterns Protein kinases ATP-binding region signature. 187 210 IPR017441 GO:0005524
Phac6g00195 432 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 86 423 - -
Phac6g00195 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Phac6g00195 432 MobiDBLite consensus disorder prediction 44 96 - -
Phac6g00195 432 Pfam Protein kinase domain 183 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00195 432 MobiDBLite consensus disorder prediction 51 83 - -
Phac6g00195 432 ProSiteProfiles Protein kinase domain profile. 181 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00195 432 SMART serkin_6 181 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00195 Phac-Chr6 4464530 4468341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00195 24 425 Core Cell Cycle Gene Families AT1G02970 55.257 1.15e-154 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Phac6g00195 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00195 K06632 - gmx:100784055 567.385