Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00193 ATGAAGAGACTCAATAACTCAAACACTATGGCTACTTCCCTTTCCCTGTGCCCATCAAAAGGTTTGAATGAGAGGAAGGAAACTCAGGGCTACAGTGAAGAGTTTCAAGCAATGTTAGACAGACTAGACCAAGAAGACAGCTATGAAGATTGTAGCTTAGTATTGGAGAAGAAAAGGAGGCTGAGTCTTGACCAGGTGAAGGCCTTAGAGAGAAACTTTGAACTGGACAACAAGCTAGAGCCAGAGCGCAAGTCCAAGCTTGCTCAACAACTAGGCCTTCAACCAAGACAAGTTGCTATTTGGTTCCAAAATCGTCGAGCTCGTTGGAAAACCAAGCAATTGGAGAGAGATTATGGCATTCTCAAGTCCAATTATGATGTTCTCAAGGTTGAGTACAATAATCTTGAGCAAGACAGTGAGGCTCTCACTGTTCAGGTAAGAGAATTGAAAGAAAAGTTGTTGAGAGGTAAAGCTGAAAACAATGAGTCAATAAAAGAAGAGTCTCCCATTTCAAAGGTAAGAGACGGAGTAGCATCAGAGAGCAATTCAAATGGTGTGGTTAAGGAAGAAAGCAACATTGATTCTGCTTTTTGTGTGAATGGATCTTTGTCCAGTTCAAGACCAGTACTTCAATACTCTGATTCAAGAGGGTCACCAGATAAAATTTTTCAGACTCAGTTTATGAGAATGGAGGAGCAGAATTTCTTTAGTATCAATGAGTTCTGTTTCTTTTCAGTTGATCAATCCCCTACCCTGTGA 759 0.4084 MKRLNNSNTMATSLSLCPSKGLNERKETQGYSEEFQAMLDRLDQEDSYEDCSLVLEKKRRLSLDQVKALERNFELDNKLEPERKSKLAQQLGLQPRQVAIWFQNRRARWKTKQLERDYGILKSNYDVLKVEYNNLEQDSEALTVQVRELKEKLLRGKAENNESIKEESPISKVRDGVASESNSNGVVKEESNIDSAFCVNGSLSSSRPVLQYSDSRGSPDKIFQTQFMRMEEQNFFSINEFCFFSVDQSPTL* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00193 252 Pfam Homeobox associated leucine zipper 112 153 IPR003106 GO:0006355|GO:0043565
Phac6g00193 252 PRINTS Lambda-repressor HTH signature 92 108 IPR000047 GO:0003677
Phac6g00193 252 PRINTS Lambda-repressor HTH signature 83 92 IPR000047 GO:0003677
Phac6g00193 252 Coils Coil 118 166 - -
Phac6g00193 252 FunFam homeobox-leucine zipper protein ATHB-6-like 60 106 - -
Phac6g00193 252 MobiDBLite consensus disorder prediction 1 19 - -
Phac6g00193 252 SMART HOX_1 55 116 IPR001356 GO:0003677
Phac6g00193 252 Pfam Homeodomain 57 110 IPR001356 GO:0003677
Phac6g00193 252 Gene3D - 56 119 - -
Phac6g00193 252 SUPERFAMILY Homeodomain-like 55 114 IPR009057 -
Phac6g00193 252 MobiDBLite consensus disorder prediction 160 186 - -
Phac6g00193 252 CDD homeodomain 57 113 IPR001356 GO:0003677
Phac6g00193 252 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
Phac6g00193 252 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 43 191 IPR045224 GO:0003700
Phac6g00193 252 MobiDBLite consensus disorder prediction 1 23 - -
Phac6g00193 252 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00193 Phac-Chr6 4431888 4433715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00193 1 252 Homeobox Transcription Factor Family AT4G40060 37.742 3.83e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac6g00193 Homeodomain 3.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00193 K09338 - cave:132184564 272.322